| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3292 |
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| Symbol | |
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| ID | 3935765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3346005 |
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| End bp | 3347030 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905665 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_511234 |
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| Protein GI | 89055783 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.18394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG GGGCCCTTTC TCAGACGCCT GACGCGGCGG ACAAGTACGT GTTGGACGTG
CGCGGCCTCA AGACCGTGTT CCGCACCCGC CGGGGTGAGG TCCACGCGGT CAACGATGTC
AGTTTCAATC TCAAGGCCGG GGAGTTGCTG GGGGTTGTCG GTGAATCCGG CTCCGGCAAG
TCAGTGACGA TGATGTCGCT CATCCGGCTT CTGCCGATGC CGCCCGCGGA AATTCGCGAC
GGGACGGTCG AGTTCGGTGA CATGGATCTG ATGCAGATCA GTGAAGACCG GCTGCGCGCG
ATCCGTGGCG CGCGGATCGG CATGGTGTTC CAGGATCCGA TGACCTCGCT CAACCCCGTG
TTCAACGTGG GCTATCAGCT GATGGAGCCG CTGCGAAAGC ATATGGGGCT GGACAAATCC
GCTGCGCGCA AGCGCTCGGT CGAATTGCTG GAGCTTGTGG GCATCCCCGA TGCCGAGCGG
CGCCTGAAGG ATTACCCGCA CCAGTTTTCC GGCGGTATGC GCCAGCGTGT GATGATTGCC
ATCGCGCTCG CCTGCGACCC GGAGGTGCTG ATCGCCGATG AGCCGACCAC GGCCCTTGAT
GTGACCATTC AGGCGCAGAT CCTGGAGCTG GTCAAAGAGC TGCGCCAGAA ACTTGGCATG
GCGATTGTCT GGATCACCCA CGATCTGGGC GTGATCGCGG GCATCGCCGA CCGGGTCATG
GTCATGTATG GCGGCCAGGT TGTGGAAGAG GGGCCCGTGC GCGCGCTGTT CAACAACCCC
AGCCACCCCT ACACGAAGAT GCTGCTGGAA ACGGTTCCCA GCATCACCGG CGAACGGGCC
GACCGCCTGC AAGTGATCCA GGGGCAACCG CCCATGCTTG GCGCGCCCCC CAGCGCCTGC
TCGTTCCGGG ACCGCTGCCC CCATGCATTT GATCGGTGCG CGCGCGAAAA CCCTCAGCTG
GCCTCCGTCG GTGAGAATGA CCACAACGCG GCCTGTTTCC TGGACGGAGG ATCGACAGAT
GCTTGA
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| Protein sequence | MPDGALSQTP DAADKYVLDV RGLKTVFRTR RGEVHAVNDV SFNLKAGELL GVVGESGSGK
SVTMMSLIRL LPMPPAEIRD GTVEFGDMDL MQISEDRLRA IRGARIGMVF QDPMTSLNPV
FNVGYQLMEP LRKHMGLDKS AARKRSVELL ELVGIPDAER RLKDYPHQFS GGMRQRVMIA
IALACDPEVL IADEPTTALD VTIQAQILEL VKELRQKLGM AIVWITHDLG VIAGIADRVM
VMYGGQVVEE GPVRALFNNP SHPYTKMLLE TVPSITGERA DRLQVIQGQP PMLGAPPSAC
SFRDRCPHAF DRCARENPQL ASVGENDHNA ACFLDGGSTD A
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