Gene Jann_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3271 
Symbol 
ID3935744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3325959 
End bp3326405 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID637905644 
Producthypothetical protein 
Protein accessionYP_511213 
Protein GI89055762 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.765913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAT ACGCGCTCAG ATGTGGCGAG GGCCATAACT TTGACAGCTG GTTCCAGTCG 
GCGGATGCCT TTGATGGCCT GGCCGACCGG GGCCTGCTCA GCTGTGCGAT CTGCGGCGGG
ACGGATGTGT CCAAGGCGAT GATGGCGCCC CGGGTGACGG CGGAGAGCCC GGCAGATGGC
CCGGTTGAGA CGCCATCGGA GACAGGCCCC CTGTCAGCGC CCGCCCACCC CGCAGAGGCC
GCGTTAAGGG CAATGCGGGA CCATGTGGAA AAGACCTCCA CCTATGTGGG CGGCAATTTC
GCCCGGGAGG CGCGGGCCAT GCATGTGGGG GATGTGCCCG AAAAGCCCAT CTACGGTCAG
GCGGGGCCAG AGGAGGCGAA GGCGTTGATC GAAGACGGCG TGCCGATCCT TCCGCTGCCG
GGCGCGCCGG GGGACAAGGC CAACTGA
 
Protein sequence
MIRYALRCGE GHNFDSWFQS ADAFDGLADR GLLSCAICGG TDVSKAMMAP RVTAESPADG 
PVETPSETGP LSAPAHPAEA ALRAMRDHVE KTSTYVGGNF AREARAMHVG DVPEKPIYGQ
AGPEEAKALI EDGVPILPLP GAPGDKAN