| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3255 |
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| Symbol | |
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| ID | 3935727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3305075 |
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| End bp | 3305929 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905627 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_511197 |
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| Protein GI | 89055746 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.709043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.549561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGA TCCGCGATCA CAACCCGTCC GAGCGGACGC CTTTCGTCAC CTGGGCCCTG
ATCGTCACGA ATATCGTGAT TTTCCTCCTC TACTATCCGT CCATCGGCGG GGATGAGGCG
CGACTGATTG TATTCTACGA GACGTGGGGC CTGGTGCCGC AATCGGTCCT GAACGGTGGC
GGAGCACAGT CGATCGTGAC GTCGATGTTC CTGCATGGCG GCTGGATGCA TCTGATCGGC
AACATGCTGT TTCTATGGAT CTTCGGTGAC AATCTCGAAG ACCTGATGGG CCATCTTGGC
TTTGCGGTCT TCTACCTGGC CAGCGGCGTC GCGGCGGCGG GCGGGCAGAT CCTGTCTGAC
CCATCCTCCA CCCTTCCGAT GGTGGGCGCG TCGGGCGCCA TCGCGGGCGT CATGGGAGGA
TATCTGCTGA TGTTCCCGCG CGCCCGGATC GATGTGCTGG TGATCCTGAT CGTCTTTATC
AAGATCTTCA CCATCCCCGC CTGGCTGATG CTGGGGCTCT GGTTCGGCCT GCAATTGGTC
AGCGGTCTGT CGATGGATCT TGTCGGCGGT GGCGTCGCCT ATTGGGCCCA TGCCGGTGGA
TTTGTGGCCG GTGTCATCCT GGCCTGGCCC ATATGGATGC GGCGGGGCGG GCGTGCGTTT
TGGGCCACGT TCGGCGGCAA ACCACCCCAT GTTGAGGTTG AATACAAAGT GGAGAAGCGC
CCCCGTTCGC CCATCCCGGC CATCCGCCGT GTGCGCAGCC CGCAGGGGGT GGACGGCGCG
CTCTCGGATA TCGGGCGCGT CCCGCGTGCG GGGGACCGTC GGGTCAGGCC CGGTCCGTGG
TCCGGCAAGC GGTAG
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| Protein sequence | MFPIRDHNPS ERTPFVTWAL IVTNIVIFLL YYPSIGGDEA RLIVFYETWG LVPQSVLNGG
GAQSIVTSMF LHGGWMHLIG NMLFLWIFGD NLEDLMGHLG FAVFYLASGV AAAGGQILSD
PSSTLPMVGA SGAIAGVMGG YLLMFPRARI DVLVILIVFI KIFTIPAWLM LGLWFGLQLV
SGLSMDLVGG GVAYWAHAGG FVAGVILAWP IWMRRGGRAF WATFGGKPPH VEVEYKVEKR
PRSPIPAIRR VRSPQGVDGA LSDIGRVPRA GDRRVRPGPW SGKR
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