Gene Jann_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3208 
Symbol 
ID3935679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3252300 
End bp3253922 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content63% 
IMG OID637905579 
Productsulphate transporter 
Protein accessionYP_511150 
Protein GI89055699 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA TTCTTCAAGC GGTCGCAAAT AGCCGTCTGT CGCCCGAGTT GTCCAATATG 
GGCCACGGGT GGGGTCTGGG TCGTATGCGG ATCGAAGTTC TGGCAGGGCT GACGGTGGCC
CTTGCGTTGG TGCCCGAGGC CGTGGCGTTT GCCTTTGTGG CTGGTGTGCA TCCGCTTGTG
GGGCTTTATG CGGCCTTCAT CGTCGGCCTG ATCACCGCAG TGATCGGCGG GCGGCCCGGC
ATGATCTCAG GCGCGACGGG CGCGCTTGCG GTCGTCATGG TCAGCCTCGT GGCCGATCAT
GGGCTGGAAT ACCTTTTGGC CACGGTCGTC CTGATGGGCG CGATCCAGAT CACCGTCGGC
ATCCTGAAAT GGGGAAAGTT CATCCGCCTC GTGCCGCATC CGGTGATGCT TGGTTTCGTC
AACGGGCTGG CCATCGTTAT TTTCCTGGCG CAGCTAGGGC AGTTCCAGGT GCCGGGCACG
GCTGAGGCGT CGGGCCATGG CATGGCGTCA GGCGAGTGGC TGCAGGGGAT GGAGATGGCG
ACGATGCTGG CGCTCGTGGT GCTGACCATG GCCATCATAT GGGCGCTCCC CAAGCTCACC
ACCGCCATCC CCGCGCCCCT TGCAGGCATC GCGATCACCG CCGCCATCGT GCTGATTTTC
GGCCTACAGG TGCCGCGCGT CGGCGATCTG GCCTCCATCG AGGGGGGCTT GCCGCTGTTC
CACATCCCCA CGGTGCCGCT GACGTGGGAA ACGTTCCAGA TCATCCTGCC ATACGCGCTG
ATCCTATCGG CCATCGGCTT GATCGAGAGC CTTTTGACCC TGAACCTCGT GGGCGAGATC
ACCGGCAAAA AGGGCGGCGC GTCTCAGGAA TGCGTGGCGC AAGGCGTGGC CAATACCGTC
ACCGGCTTCT TCGGCGGCAT GGGCGGTTGC GCGATGATCG GCCAGTCGAT GATCAACGTG
AAATCCGGCG CCCGCACGCG GGTGGCCGGT GTGGCCGCCG CGCTATTTTT GTTGTCCTTC
ATCCTCTTTG GGTCGAGCCT GATCGAGCAG ATCCCGCTCG CGGCCCTCGT GGGCGTCATG
TTCATGGTCG TGATCGGCAC CTTCGCCTGG AACTCCCTGA AAATCCTGTT CAAGGTTCCT
CTCACAGATG CTTTCGTCAT CGTCCTCGTG ACCGTCGTGA CCGTTGCCAC GGACCTTGCG
ACCGCCGTGG TTGTGGGTGT CATCGTCTCC GCCCTGGCCT ATGCTTGGCA AAACGCCACG
CGCATCTCCG CCAGCACCTA TGAGACGCCC GAGGGTGCGC GCGTCTACCA GGTCAAAGGC
CCGCTTTTCT TTGGCTCCGC CGCGGGTTTC GGTGAACTTT TTTCGCCTGA GACCGATCCC
TCCCTTGTGG TCGTGGACTT TGCCGACAGC CGTGTCGCCG ACCAATCCGC CCTGCAAGCG
ATTGAGAAGC TGGCCGCCCA ATACGAAGCT GCGGGCAAGA AAATCGAACT GCGCCACCTG
ACCCGTGACT GCCACGCACT GCTGACCAAG GCGGGTCACC TCGTCGTCGA TAGCGACGAT
GACCCGGATT ATGAGATCGC GACAGATTAT TCCGTCCGCA CCGGGATTTT GGGCGAGCAC
TAA
 
Protein sequence
MSRILQAVAN SRLSPELSNM GHGWGLGRMR IEVLAGLTVA LALVPEAVAF AFVAGVHPLV 
GLYAAFIVGL ITAVIGGRPG MISGATGALA VVMVSLVADH GLEYLLATVV LMGAIQITVG
ILKWGKFIRL VPHPVMLGFV NGLAIVIFLA QLGQFQVPGT AEASGHGMAS GEWLQGMEMA
TMLALVVLTM AIIWALPKLT TAIPAPLAGI AITAAIVLIF GLQVPRVGDL ASIEGGLPLF
HIPTVPLTWE TFQIILPYAL ILSAIGLIES LLTLNLVGEI TGKKGGASQE CVAQGVANTV
TGFFGGMGGC AMIGQSMINV KSGARTRVAG VAAALFLLSF ILFGSSLIEQ IPLAALVGVM
FMVVIGTFAW NSLKILFKVP LTDAFVIVLV TVVTVATDLA TAVVVGVIVS ALAYAWQNAT
RISASTYETP EGARVYQVKG PLFFGSAAGF GELFSPETDP SLVVVDFADS RVADQSALQA
IEKLAAQYEA AGKKIELRHL TRDCHALLTK AGHLVVDSDD DPDYEIATDY SVRTGILGEH