| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3179 |
|---|
| Symbol | |
|---|
| ID | 3935650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3219760 |
|---|
| End bp | 3221055 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905550 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_511121 |
|---|
| Protein GI | 89055670 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG TCGTCGTCGT CGGTGCGCAA TGGGGTGACG AGGGGAAGGG CAAGATCGTC
GATTGGCTCA GTGAACGTGC CGATGTGATT GCCCGGTTCC AAGGTGGTCA CAATGCGGGC
CACACCCTCG TCATCGACGG TGAAGTCTTC AAGTTGCACG CGCTGCCCTC GGGGGTTGTG
CGCGGTGGCA AGCTGTCGGT GATCGGCAAT GGTGTCGTGC TGGACCCCTG GCATCTGGTC
AAGGAAATCG CCACGATCCG CGACCAAGGC GTCGATATTT CGCCCGAAAC GCTGATGATC
GCCGAAAATA CGCCGCTGAT CCTTCCCATT CACGGAGAGC TGGATCGTGC GCGGGAAGAG
GCCGCGTCAT CCGGCACCAA GATCGGCACG ACGGGCCGCG GCATCGGTCC CGCCTATGAG
GATAAAGTGG GCCGCCGCTC GGTCCGGGTT GCGGACCTTG CGGACCGTGC GACGCTGGAG
GCGCATGTCG ACCGCGCGTT GCAACACCAC GACCCGCTGC GCCGGGGCCT TGGCATTGAT
CCCATCGACC GCAACGCTCT GATTGACGCC TTGACCGAGA TCGCACCGCA GATCCTGCAA
TACGCCGCCC CCGTCTGGAA GGTGTTGAAT GAAAAGCGGA AAGCCGGGAA GCGGATCCTG
TTTGAGGGGG CCCAAGGCGC GCTTTTGGAT ATTGATTTCG GCACCTATCC CTTTGTGACG
TCGTCCAACG TGATTGCGGG GCAGGCGGCG ACCGGTGTGG GCCTGGGCCC CAACGCCATC
GACTACACCT TGGGCATCGT GAAGGCCTAC ACCACCCGTG TGGGCGAAGG GCCGTTCCCG
ACCGAGCTGG AGGACGCCGA TGGTCAGCGT CTGGGCGAGC GTGGCCATGA ATTTGGCACA
ACCACCGGCC GTAAGCGGCG CTGTGGCTGG TTCGATGCAG CCCTCGTGCG CCAGACCTGC
GCCACCTCCG GCGTGACGGG CATCTCCCTG ACAAAGTTGG ACGTGCTGGA CGGGTTCGAG
ACGTTGAAGA TCTGCGTGGG CTACGATCTG GACGGAACCC GCCTGGATTA TTTGCCGACC
GCCGCCGATC AGCAGGCCCG ATGTACACCC ATATATGAGG AGATGCCGGG CTGGTCCGAC
AGCACGGAAG GCGCGCGGTC CTGGGCGGAT CTGCCTGCAG CCGCGATCAA ATACGTCCGC
CGCGTCGAAG AGTTGATCCA ATGCCCCGTG GCGCTACTGT CTACCTCGCC CGAACGGGAA
GACACGATCC TCGTGACGGA TCCCTTCGCG GATTGA
|
|---|
| Protein sequence | MANVVVVGAQ WGDEGKGKIV DWLSERADVI ARFQGGHNAG HTLVIDGEVF KLHALPSGVV
RGGKLSVIGN GVVLDPWHLV KEIATIRDQG VDISPETLMI AENTPLILPI HGELDRAREE
AASSGTKIGT TGRGIGPAYE DKVGRRSVRV ADLADRATLE AHVDRALQHH DPLRRGLGID
PIDRNALIDA LTEIAPQILQ YAAPVWKVLN EKRKAGKRIL FEGAQGALLD IDFGTYPFVT
SSNVIAGQAA TGVGLGPNAI DYTLGIVKAY TTRVGEGPFP TELEDADGQR LGERGHEFGT
TTGRKRRCGW FDAALVRQTC ATSGVTGISL TKLDVLDGFE TLKICVGYDL DGTRLDYLPT
AADQQARCTP IYEEMPGWSD STEGARSWAD LPAAAIKYVR RVEELIQCPV ALLSTSPERE
DTILVTDPFA D
|
|---|
| |