| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3166 |
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| Symbol | aspS |
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| ID | 3935637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3205115 |
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| End bp | 3206890 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905537 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_511108 |
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| Protein GI | 89055657 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.178298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT ACCGCAGCCA TTCCTGTGCC GCCCTGACCG CCGCAAATGT CGGCGAGACG
ATCCGCCTTT CGGGGTGGGT GCATCGTCGC CGTGACCACG GTGGCGTGAT CTTCATCGAC
CTGCGCGACC ATTTCGGCAT CACCCAGATT CTCTGCGATC CCGACAGCCC TGTGTTTGCA
GAGGTTGAAA AACTGCGGGC GGAGTTTTGT ATCCGCATCG ACGGCGAGGT GAAGGCGCGT
GCGCCGGAGC TGGTGAACGA GAAGCTGCCG ACGGGTGAGA TTGAGGTCTA TATCCGCGAT
ATGGAAGTCC TTGGCGCTGC TGGCGAGTTG CCTCTGCAGG TCTTTGGCGA TCAGGAATAC
CCTGAGGAAA CGCGCCTGAA ATACCGCTAC CTCGACCTGC GGCGCGAGAA GATGCAAACC
AACATGATGC TGCGGTCCGA CGTGGTGGCG AGCATCCGTA AACGGATGTG GGACAAGCAA
TTTCGGGAGT ATCAGACGCC GATCATCACC GCCTCTTCGC CTGAGGGTGC ACGCGATTTC
CTTGTGCCCT CTCGTCAGCA CCCGGGTAAA TTTTACGCAT TGCCGCAAGC GCCGCAGCAA
TTCAAACAGC TGCTGATGGT GTCGGGCTTC GACAAATATT TCCAGATCGC GCCGTGTTTC
CGCGATGAAG ACCCGCGGGC GGACCGCTCT CCGACGGATT TCTATCAGCT CGACCTTGAG
ATGAGCTTTG TGGAGCAGCA GGACGTCTTC GACACGATCG AGCCGGTGCT GCGCGGCGTG
TTTGAGGAAT TCGGCGACGG CGCGACCGTG GATCAGCAGT GGCCGCTGAT CAGCTATGCC
GACGCGGCGC TTTGGTATGG CACCGACAAG CCGGACCTGC GCAATCCGAT CAAGATGCAA
ATCGTCTCCG AGCACTTCGC GGGGTCAGGC TTCGCGATTT TCGCCAAACT GCTGGAGCAG
GAGGGCACCC AGGTGCGCGC CATTCCCGCG CCCAAAGGCG GTTCGCGGAA ATTCTGCGAC
CGGATGAACA AGTTTGCGCA GGAGCAGGGA TTGCCCGGGA TGGGGTATAT CTTCTGGCGC
GATCAGGGCG AAGGGATGGA AGCGGCGGGC CCGCTGGCCA AGAACATCGG GCCCGAGCGG
ACGGAAGCCA TTCGCCAGCA GCTTGACCTC GGCGTCGGGG ACGCGGCGTT TTTCCTTGCG
GGCAAGCCGT CACAGTTTGA GGCGGTTGCA GGCCGAGCCC GCTCCGTTAT CGGCGATGAG
TTGGGTCTGA CGGAGCAAAA CCGGTTTGCC TTTGCCTGGA TCGTCGATTT CCCGATGTTC
GAGGCCGATG AGGAAACTGG GAAAATCGAT TTTTCCCACA ACCCCTTTTC CATGCCGCAG
GGGGGACTTG CGGCTTTGGA CGGGGATCCG CTGTCAGTTC TGGGCTACCA GTATGACCTG
GCGTGCAACG GCTATGAGCT GGTGTCTGGT GCGATCCGGA ACCACCAGCC CGAGATCATG
TTCAAGGCGT TCGAGGTGGC GGGTTACGGG GCCGATGAGG TGCGCAAGCG CTTTGGCGGT
ATGGTCAACG CGTTCCAGTA TGGCGCGCCG CCCCACGGTG GATGTGCGGC CGGGATCGAC
CGGATCGTGA TGCTTCTGGC CGATACGGCC AACATCCGCG AAGTGATTCT GTTTCCGATG
AACCAGCGTG CCGAAGATCT GATGATGAAT GCGCCGTCCG AGCCGATGCC CGATCAGCTG
ATGGAGCTTG GTCTGCGCGT TCTCCCTCAG GATTGA
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| Protein sequence | MHAYRSHSCA ALTAANVGET IRLSGWVHRR RDHGGVIFID LRDHFGITQI LCDPDSPVFA
EVEKLRAEFC IRIDGEVKAR APELVNEKLP TGEIEVYIRD MEVLGAAGEL PLQVFGDQEY
PEETRLKYRY LDLRREKMQT NMMLRSDVVA SIRKRMWDKQ FREYQTPIIT ASSPEGARDF
LVPSRQHPGK FYALPQAPQQ FKQLLMVSGF DKYFQIAPCF RDEDPRADRS PTDFYQLDLE
MSFVEQQDVF DTIEPVLRGV FEEFGDGATV DQQWPLISYA DAALWYGTDK PDLRNPIKMQ
IVSEHFAGSG FAIFAKLLEQ EGTQVRAIPA PKGGSRKFCD RMNKFAQEQG LPGMGYIFWR
DQGEGMEAAG PLAKNIGPER TEAIRQQLDL GVGDAAFFLA GKPSQFEAVA GRARSVIGDE
LGLTEQNRFA FAWIVDFPMF EADEETGKID FSHNPFSMPQ GGLAALDGDP LSVLGYQYDL
ACNGYELVSG AIRNHQPEIM FKAFEVAGYG ADEVRKRFGG MVNAFQYGAP PHGGCAAGID
RIVMLLADTA NIREVILFPM NQRAEDLMMN APSEPMPDQL MELGLRVLPQ D
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