| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3154 |
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| Symbol | |
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| ID | 3935625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3193713 |
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| End bp | 3194642 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905525 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_511096 |
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| Protein GI | 89055645 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TTACTGCACA AACGACGACG GAGCCCCGCG AATATGACGC GGGGTTTGGT
GATTATTTCG CGCTTCTCAA GCCGCGTGTG ATGTCACTGG TCGTGTTCAC CGCGTTGGTG
GGGATCCTCG TCGCCCCGGG CGGGGTGTCT CCGATGATCG GCTTCACGGC AATCTTGTTC
ATTGCACTTG GGGCAGGGGC CTCGGGCGCG CTGAACATGT GGTATGACGC AGACATTGAC
GCCGTCATGA AGCGCACCGC CAAGCGGCCC GTGCCTGCGG GCAAGGTTCC GGCGGGGGAG
GCTTTGACGC TTGGACTTTG GCTGTCGGCG ATCTCCGTCG CGATGCTGGG TCTGGCGACC
AATTGGGTCG CGGCGGGCCT GCTGGCCTTC ACCATTTTCT TCTACGCCGT CGTCTATTCC
ATGTGGCTCA AGCGGGCCAC GCCGTGGAAT ATCGTGATCG GTGGCGCGGC AGGCTCTTTC
CCTCCGATGA TCGGATGGGC GGCGGTGACG GGTGATGTGT CGCTGGCGTC GGTCCTGATG
TTCGGGATCA TCTTCATGTG GACGCCGCCT CATTTCTGGG CGCTCGCGCT GTTCCTGAAG
AAGGATTACA ACAACGCGGG CGTGCCGATG TTGACCGTGA CCCATGGCCG GACCGAGACG
CGCCGCCAGA TCCTGATTTA CACAATCCTG CTGGTGCCCG TAGCCCTTGG CCTTGTGCTG
ACCGAGGTGG CGGGGCCCGT TTACCTGATC ACCGCCCTGG TCTGTAACGC GATTTTCCTC
AAGGGCGCCT ACGACATCTG GAAACGCGAT GAGGCGATGG CCGAGGCTGA TGGCTACGCG
GTCGAGAAGA AGGTGTTCAA GTTCTCGCTG CTCTATCTGT TCCTGCACTT CGGTGCCTTG
TTGCTGGACG CAATCTGGAG GTTGATCTGA
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| Protein sequence | MSDFTAQTTT EPREYDAGFG DYFALLKPRV MSLVVFTALV GILVAPGGVS PMIGFTAILF
IALGAGASGA LNMWYDADID AVMKRTAKRP VPAGKVPAGE ALTLGLWLSA ISVAMLGLAT
NWVAAGLLAF TIFFYAVVYS MWLKRATPWN IVIGGAAGSF PPMIGWAAVT GDVSLASVLM
FGIIFMWTPP HFWALALFLK KDYNNAGVPM LTVTHGRTET RRQILIYTIL LVPVALGLVL
TEVAGPVYLI TALVCNAIFL KGAYDIWKRD EAMAEADGYA VEKKVFKFSL LYLFLHFGAL
LLDAIWRLI
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