| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3143 |
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| Symbol | |
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| ID | 3935614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3182091 |
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| End bp | 3183506 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905514 |
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| Product | major facilitator transporter |
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| Protein accession | YP_511085 |
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| Protein GI | 89055634 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.385711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCGG CCCGCCTGCC CCCGATGCAC CCGCCGATGC CGGTCCTGGC CCGCGGAAGA
GACCCGGGGG GTCTGATCTG CGTGGACGGA TCCCGCACCA AACACCATGT CACCCGGATC
AACGCCACAC CCCCTTGCAC CCCTGCGTCA AGAGGCGCAC ACCGGGCGCA GTCCAGCGCC
CCAAGGCATC GATCCATGCG CCTCCTGATC TCTTTCGCGG CCCTCTTTCT TTCGGTCATC
CTGTTGCAAT TGTCGTCCAG CGGCGTCGGG CCGCTCGACG TGCTATCGGG CACGGCGCTG
GGGTTCACCA ACGGTCAGAT CGGCCTTCTG GGCTCGGCGC ATTTCCTGGG CTTCTTCATC
GGCTGCTGGT GGGCCCCGCG CCTGATGGGG TCAGTCGGGC ATTCCCGCGC ATTTGCCGTG
TTCACCGCCA TGGGGGCGAT CGGCCTTCTG GCGCATATGC TGGTGATTAA CCCCTATGCC
TGGGCCGCGA TGCGCATTTC CACCGGGCTG TGTATTGCGG GCTGTTTCAC GGTGATCGAG
GCCTGGCTGC AAGCCAAAGC CACGAACGAG ACCCGGGGCC GCACCATGGG CGTCTACCGG
ATGGTCGACA CTGGCGGGCA GCTGGCAGCG CAATTCATGA TCGGTGTGCT CGCGCCCGCG
TCCTACGTCT CCTACAACCT GCTGGCGATC CTGTGTTGTG CGGCGCTTTT GCCCCTGACA
CTGACCCGCC TGAAGCAGCC CGAGAGCCAT GGCACACCGC GCCTGCGCCC CCTCATGGCG
TGGCGATTGT CGCCCCTGGC TGTGAGCGGT GTCGCGGTGG CGGGCGTGTC GTCTGCATCG
CTGCGGATGA CCGGCCCGCT TTATGGCCAG CAGGTGGGGC TGGAGGCCAG TGACATCGGC
CTGTTCCTCG CCGCATTCGT GCTTGGCGGG GCGCTGGCGC AGTGGCCTGC GGGCTATCTG
GCCGACCGCT ATGACCGGCG GCGCGTGCTG ATCGGGTTCT CCATGGCCTC CATCGTGTCC
TGCGCCGTGA CCATCGCGGT GCCGGGCCTG GGGCCCATCG GCATCTTCGG GGCGGCGCTG
CTGTTCGGGG CCACGACCTT TCCGATCTAT TCCGTCTCTG CCGCCCATGC CCATGACTGG
GCGAGCGACG ATCAACGGAT CGAGCTGTCG GCCGCGCTGA TGTTCTTTTT CGCCTGTGGG
GCCATCGTCG CCCCGCTAAC GACCTCGGGC CTGATCAGCG CCTTCGGCCC GGCGGCGCTG
TTTTACTTCA TCTCCGTCGC CCACGCCCTG CTGATCGTGT TCAGCCTTGT GCGCATGGGC
CGCCGGGCGG CGTCCGGCAC CCGCAAACCC TACATCTGGA TCCCGCGCAC GTCGTTTCAG
GTCGGCCGCA TCTTCCGGCG CGGAAACGAC CCATAA
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| Protein sequence | MAPARLPPMH PPMPVLARGR DPGGLICVDG SRTKHHVTRI NATPPCTPAS RGAHRAQSSA
PRHRSMRLLI SFAALFLSVI LLQLSSSGVG PLDVLSGTAL GFTNGQIGLL GSAHFLGFFI
GCWWAPRLMG SVGHSRAFAV FTAMGAIGLL AHMLVINPYA WAAMRISTGL CIAGCFTVIE
AWLQAKATNE TRGRTMGVYR MVDTGGQLAA QFMIGVLAPA SYVSYNLLAI LCCAALLPLT
LTRLKQPESH GTPRLRPLMA WRLSPLAVSG VAVAGVSSAS LRMTGPLYGQ QVGLEASDIG
LFLAAFVLGG ALAQWPAGYL ADRYDRRRVL IGFSMASIVS CAVTIAVPGL GPIGIFGAAL
LFGATTFPIY SVSAAHAHDW ASDDQRIELS AALMFFFACG AIVAPLTTSG LISAFGPAAL
FYFISVAHAL LIVFSLVRMG RRAASGTRKP YIWIPRTSFQ VGRIFRRGND P
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