Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3091 |
Symbol | |
ID | 3935562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3126146 |
End bp | 3127132 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905462 |
Product | LacI family transcription regulator |
Protein accession | YP_511033 |
Protein GI | 89055582 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.224445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.366148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACAG TCAAAGATGT AGCCCGTCAC GCTGGTGTGT CCGTCGGGAC CGTCTCCAAG GTTTTGTCGC GCGACGATAC CGTCAAAGAG GCGCTGCGGG ACCGTGTCCT GTCCGCCGTC ACGGACCTGG GCTACAAACC CAACATGGCG GCGCGCGCCC TGCGCACCAA GAAGGTCAAT ATCATCGGTC TGGTCGTGCC TGACATCACC AACCCGTTTT TTGCGAACCT TGCCAAAGAT ATCGAAATGC TGGCGTCTGC GCGGGGCCAT ACGGTCATGT TGACAAACTC CCACGACGAC GCCCCTACCG AAAAGCGCCA GATAGAGGCG CTGCTGGATC AAAACCCCAG CGGCCTGATC GTCGTGGCGT CCAGTGACGC AAGCGGCATC ATGCTGGACG GTCAGGTGCC GGTCATTTCC ATCGACCGCC GTCTGGGTGC GTTCCCCCTC GTGGCAACCG ACCATGCCGA CGGCTCTGCC AAGATCGCCG AGCATCTGGT TCATCTTGGG CACCGGCGCA TCGCCTACCT CGCCGGGCCC CAGAACACCG AGGTGGGTCG CCTGCGCCTT GCCGGATTTG AACGGGCGAT TGCGACCCTT GAGGCGCACC ACGAGGGCCT CAGGGTGACC AAGTTGTCCG GCAACTTTGA CTATCAGACC GGCGAGACCC TGGCGCGGGA TCTGCTGATC CGCCCGGTCG AAGATCGCCC GACGGCCATT GCAGCAGCCA GCGATCAGAT GGCCATTGGT GTCCTTCGGG CCGCCAATGA CATGGGACTT TCGGTTCCGG GCGACGTCTC ACTTGCGGGT TTCGATAACG TCGCCCTGGC CGAACTTGTC GTGCCCCGAC TGACGACAAT CGCCCAACCG ACCCGGGCCT TGGCCGAGGC TGCAATCGGT CAATTGCTGG ACCGCCCATC GGCTGACATG ACGGATGAGG TGATCTCGGG CACACTCGTT GCCCGTGGCT CCACCGCCGC CGTGTGA
|
Protein sequence | MPTVKDVARH AGVSVGTVSK VLSRDDTVKE ALRDRVLSAV TDLGYKPNMA ARALRTKKVN IIGLVVPDIT NPFFANLAKD IEMLASARGH TVMLTNSHDD APTEKRQIEA LLDQNPSGLI VVASSDASGI MLDGQVPVIS IDRRLGAFPL VATDHADGSA KIAEHLVHLG HRRIAYLAGP QNTEVGRLRL AGFERAIATL EAHHEGLRVT KLSGNFDYQT GETLARDLLI RPVEDRPTAI AAASDQMAIG VLRAANDMGL SVPGDVSLAG FDNVALAELV VPRLTTIAQP TRALAEAAIG QLLDRPSADM TDEVISGTLV ARGSTAAV
|
| |