| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3089 |
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| Symbol | |
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| ID | 3935560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3123961 |
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| End bp | 3124974 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905460 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_511031 |
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| Protein GI | 89055580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4158] Predicted ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0871348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.381344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC AGACCCCCGG TGCCCAACCG CCCCCAGCCA GCGGACCCGC ACCGCGCGCC
CTGACGCTGC GCGGCATCAT CAACAAAGCC GGGATTGGCC TGGCGCTGGT TCTCCTGATC
ATCTTCTTCT CGGTCACAAC CGAGTTTTTC CTGACCCCCA ACAACATCAC CAACATCCTG
ACGCAGATCA CGATCAACCT GATCCTCGCG GTCGGCATGA CATTTGTCAT TCTCATCGGT
GGTATCGATC TGTCGGTCGG GTCGGTCATG GCCTTTTCCG CGGTGGTCGC GGGCAAGGTC
ATCACGCTGC CCGGTATGGG TCCGACAGAG TTGATCATTC TGGCCGTTCT GGCCGGTCTG
ATCGCGGGCA TGATCTGCGG GATGATCAAT GGCGCGATCA GTGCCTATTG GTCGTTGCCG
TCGTTCATCA TCACGCTTGG GATGCTGAAC ATCGCGCGCG GTGCCGGGCT TCAGATTTCG
GGCGCGCAAA CAATCTATGC CTTCCCCTTC GCGTTTGAGG AATTCGGCTC GATCCTGATC
TATGGCGTCC CGGTTGTCTT CCTGGTGGCG CTGGCCCTTG TCGGTGTTGC CTGGTTCGTG
CTGAACAGCA CGGTCTTCGG TCGCCTGATC TACGGGATCG GCAACAATGA GGAAGCCGTC
CGCCTTGCCG GTCATCCGGT GTTCTGGATC AAGGTCGCCG CCTTCACGAT CTGTGGCATG
ACCGCAGGCA TCGCTGCGAT CATCTACATG GCGCGCCTCA ATATCTCGTC GCCCATTGCG
GGCATCGGGT TTGAGCTGAA CGCCATCGCC GCCGTCATCA TCGGCGGCAC CAGCCTGAAT
GGCGGGCGCG GATCGGTGAT CGGCACGCTG TTGGGCGCAT TCATCATCGG GGTGCTCGCC
AACGGTCTGA TCCTGATCGG GCTGAGTGAT TTCATGCGCC AGATGATCAC CGGGGTTGTC
ATCGTCGTGG CCGTCATTCT GGACCATTAT CGCGCAAAGT ACTCTGCCTC ATGA
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| Protein sequence | MNTQTPGAQP PPASGPAPRA LTLRGIINKA GIGLALVLLI IFFSVTTEFF LTPNNITNIL
TQITINLILA VGMTFVILIG GIDLSVGSVM AFSAVVAGKV ITLPGMGPTE LIILAVLAGL
IAGMICGMIN GAISAYWSLP SFIITLGMLN IARGAGLQIS GAQTIYAFPF AFEEFGSILI
YGVPVVFLVA LALVGVAWFV LNSTVFGRLI YGIGNNEEAV RLAGHPVFWI KVAAFTICGM
TAGIAAIIYM ARLNISSPIA GIGFELNAIA AVIIGGTSLN GGRGSVIGTL LGAFIIGVLA
NGLILIGLSD FMRQMITGVV IVVAVILDHY RAKYSAS
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