| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3088 |
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| Symbol | |
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| ID | 3935559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3122426 |
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| End bp | 3123964 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637905459 |
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| Product | ABC transporter related |
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| Protein accession | YP_511030 |
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| Protein GI | 89055579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0116674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.620791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAAT CTTCCTCAGC ACCGCTTCTG ACGGTTCAAG ATCTGCGTAA ATCCTTTGGC
GGTGTTCATG CCCTCGAAGG CGTCAGCTTT GAACTTGAAC AGGGCGAAAT CCACGCCCTT
GTCGGCGAAA ACGGGGCCGG GAAGTCCACG TTGATCAAGG TTCTGTCCGG TGTTCACGCC
TTTGATGCAG GCACGATCAC TCTGGACGGG CAGCCCTATG TTCCTGCCAA TCCCCATGCG
GCCAAGATAG CTGGCCTTCA GGTGGTGCAC CAGGAATTCA ACCTTCTCAA TGACCTCAGC
GTGGCTGAGA ATATCTCGAT TGAGGCGATG CCGAAAACCC GGCTGAAATT GCTGGATCGC
CGAGAGATGA ACCGCCGCGC CCGAACGGCG CTGGATGCCA TCGGATTGGA AGATGTCGAT
GTAAGCGCGC GCGTCAGAAC GCTGGGGATC GCGCATCGGC AGCTGGTTGA GATCGCCCGC
GCGCTGCAAA GCGACAGTCG CATCCTGATC CTCGATGAAC CCACCGCGAC CCTGACGGAA
CGCGAAACGA TCCGTTTGTT CGAGATCATC CGCGATATCC GCAAGCGCGG CGTTACGATT
GTCTTCGTGT CCCACCACCT CAACGAAGTG TTCGATATCT GCGACCGTGT CACCGTGTTC
CGCAATGGCA ATACGATTAC GACTGAATTG ATCGCCGACA CCACCCCCGA CCATGTCGTG
CGCCACATGG TCGGGCGCGA ATTGGCGGGC ACGGATGACA TGCACCCCAG CCAGGCTGCG
GAGGACGTGG TGCTGGAGGT ATCTGGCCTG CGGACCATGG CGAACAAGAC CGACAGCAGC
GTCAGTTTCC AGCTTCACCG AGGTGAGATT CTGGGGATTG CAGGGCTGGT CGGGGCTGGC
AGGACCGAGG TGCTGCGTGG CCTCTTCGGC GCCGATCCCA TCCAGGCTGG GTCGATTTCC
GTAAATGGCC AGCCGGTGTC CATCGCCTCC CCCAGCGATG CAATTTCCAA GGGCATCGGC
TTCGTCACCG AAGATCGCAA GGAGGAAGGC CTGATCCTTG ATATGCCTAT CACCGCGAAT
TCTTCGCTGG TGGATCTGTC GTCCGTCACC AAACGCGGAT TGCTGCAATT CTCCAAGGAA
AACGAGATGG CCCGCAACGG CGCGGATATG CTGCACCTGA AATACGGCAA ACTTTCCGAT
GCGGCGGCCA GTCTGTCGGG GGGCAATCAA CAAAAGGTGG TTCTGGCGAA GTGGTTGGCC
AAGCAGCCCT CGATCCTGTT TCTGGATGAG CCGACGCGCG GCGTCGATGT GGGGGCCAAG
GCCGAGATCT ATGGCATCCT CCGCGATCTT GCGCGCAGGG GCATGTCGAT GATCGTCGTC
TCCTCGGAAA TGCCGGAACT GATCACCCTG TCGGACCGGA TCATGGTGAT GGCCAATCAT
ACGATCCAGG GCGTTTTGCC ACGCGCAGAC GTCACCCAGG AACGGATCCT GAAACTCGCC
TACGGGCAAC ACGGCGATAT GGAAAGACAA ACAGCATGA
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| Protein sequence | MRQSSSAPLL TVQDLRKSFG GVHALEGVSF ELEQGEIHAL VGENGAGKST LIKVLSGVHA
FDAGTITLDG QPYVPANPHA AKIAGLQVVH QEFNLLNDLS VAENISIEAM PKTRLKLLDR
REMNRRARTA LDAIGLEDVD VSARVRTLGI AHRQLVEIAR ALQSDSRILI LDEPTATLTE
RETIRLFEII RDIRKRGVTI VFVSHHLNEV FDICDRVTVF RNGNTITTEL IADTTPDHVV
RHMVGRELAG TDDMHPSQAA EDVVLEVSGL RTMANKTDSS VSFQLHRGEI LGIAGLVGAG
RTEVLRGLFG ADPIQAGSIS VNGQPVSIAS PSDAISKGIG FVTEDRKEEG LILDMPITAN
SSLVDLSSVT KRGLLQFSKE NEMARNGADM LHLKYGKLSD AAASLSGGNQ QKVVLAKWLA
KQPSILFLDE PTRGVDVGAK AEIYGILRDL ARRGMSMIVV SSEMPELITL SDRIMVMANH
TIQGVLPRAD VTQERILKLA YGQHGDMERQ TA
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