Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3087 |
Symbol | |
ID | 3935558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3121307 |
End bp | 3122338 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637905458 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_511029 |
Protein GI | 89055578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.154884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.401469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTT TCATATTGAC AGATCACAGC GGGTCTGACT TCCTGACCCG TGCCAAAGGT CCACGCCGGG AGGGCGCGAC CAAGGCACCA AATATGAATT GGGAGGCTCT TATGAAGCTC TTGAAAAACA CCGCCGCGGC GGTGACCGCT CTCGCTTTGT CTGTAGGTAT GGCGGCAGCC CAGGATCAAC CGACCGTTGG CCTGATTATG AAGTCGCTTG CCAACGAATT CTTCCAGAAC ATGATGGTTG GGGCGGAAGC CCATGCCGAA GAACGCGGCG ATTACGAATT GCTGGCCGTC GGAATGCAGA ACGAAACCGA CTTCGAGTCG CAGATCAACG CGGTGGAGAA CTTCATCACC CAGGGCGTTG ATGCCATCGT TGTCGCCCCG GCGGATTCGC GCGCCATGGT ACGGCCCCTG CGCCGCGCGA TGGAGGCAGG CATCACCGTG ATCAACTTCG ACGTGGCGCT GGACACCGGC GCGATGGAAC AGCAAGGCAT TGAGCTTGCC TTTGTTGGGC CCGACAACCG GATGGGTGCA GAGATGGCGG GCAACGCCCT TGGGGAAGCT CTTGGCGAAG GCGGGCGTGT TGTCATCATC GAAGGCAACC CGGGCGCGGA TAACGCAACT CAGCGGCGCT TGGGGTTTGA AGATGCAATT GCCACCCACG GTCTTGAACT TCTCGAAAGC CGCACCGCCC ATTGGGAAAC GGAAGAAGCC AATCAGGTGT TCGCTGCGAT GCTGACGGCG CATCCGGATC TACAAGGTGT GATGGCGGCA AACGATTCGA TGGCGATCGG TGTGATCGAA GCGCTGGATG CCGCGGGCCG CGATGACATT CTTGTCGTTG GCTTCGACGC CGTCCCCGCC GTTCTGCCAA TGATAGAAGA TGGCCGGATG TTGGCCACCG TGGATCAGTT CGGGCAGGCC ATGGCAGCCA ACGCCATCGA CCTGGCGCTG GAGGTGCTTG AAACGGGCGT GGATCTTGAA GGTTGGGTCC GCACGCCGAT CGAGCTTGTG ACAGCCAACT AA
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Protein sequence | MKRFILTDHS GSDFLTRAKG PRREGATKAP NMNWEALMKL LKNTAAAVTA LALSVGMAAA QDQPTVGLIM KSLANEFFQN MMVGAEAHAE ERGDYELLAV GMQNETDFES QINAVENFIT QGVDAIVVAP ADSRAMVRPL RRAMEAGITV INFDVALDTG AMEQQGIELA FVGPDNRMGA EMAGNALGEA LGEGGRVVII EGNPGADNAT QRRLGFEDAI ATHGLELLES RTAHWETEEA NQVFAAMLTA HPDLQGVMAA NDSMAIGVIE ALDAAGRDDI LVVGFDAVPA VLPMIEDGRM LATVDQFGQA MAANAIDLAL EVLETGVDLE GWVRTPIELV TAN
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