| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3070 |
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| Symbol | |
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| ID | 3935541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3103426 |
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| End bp | 3104727 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905441 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_511012 |
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| Protein GI | 89055561 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0281034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCGA ATGCAGAATT GAAAGCGCGC CGTGAGCACG CGGTGGCGCA TGGCGTGGCG
ACACGCGGGA TCTATGCCGC ACGCGCCGAG AACGCTGAAT TGTGGGACGT TGAGGGCCGC
CGTTATATTG ATTTCGCCGC CGGGATCGCG GTGAACAACA CGGGCCATCG TCACCCCAGG
GTCATGGCGG CTGTCGCAGA ACAGGCCGCC GCTTTCACCC ATACCTGTTT TCACGTCGCG
CCGTTTGAGG GGTACATCCG GTTGGCCGAG CGGTTGAACG CCGCCACGCC CGGCGACTTC
GCGAAGAAAA CGATGCTTGT GACAACCGGC GCTGAGGCGG TGGAGAACGC CGTGAAGATG
GCCCGGGCCT ATACCGGACG TTCTGGCGTC ATCGCTTTTT CGGGCGCATT TCATGGACGA
ACCCTGATGG GCATGGCCCT GTGCGGCAAG GTCGCGCCCT ACAAGAAAGG CTTCGGCGCG
ATGCCACCCG AAGTGTATCA CGCACCCTTC CCCAACACCT ACCACGGCGT CACACCGGAC
CAGAGCCTCG CCGCACTGGA GGAGTTGTTT CGGTCGTCAA TCGACCCGGA CCGTGTCGCG
GCGATCATTA TCGAACCGGT GCAAGGCGAG GGCGGGTTCA ACATCGCGCC CGCGTCTTTC
CTGCGCGACT TGCGGACACT CGCTGACGCC CATGGCATTC TTCTGATCGC CGATGAGGTT
CAGGCCGGCA TGGGGCGGAC GGGTCGGCTG TTTGCCTTTG AACACGCCGA TGTCGCGGCG
GATCTGGTGA CATTGGCCAA GGGTTTGGCG GGCGGGTTCC CCCTGTCAGC CGTGACCGGA
CGCGCGGAGG TTGTGGACGC CGCCCCTGCC GGTGGCATCG GCGGGACCTA TGCGGGCAAT
CCCATTGCAG TCGCTGCGGC CAACGCAGTC CTTGACGTGA TCGCCGAGGA AGAACTGTGT
GCCCGCGCCA CCGCGATAGG CGCCCGGATC ATGACCCACC TGCGCACCCT TTCCGACAGA
CCCGGATTTC AAGCTATCGG GGACGTGCGC GGCCTCGGGG CCATGGTCGC GTTTGAACTG
GTCACGGATC GCGCCGCCCG CACACCCGAT GCCGCGCTCA CGTCGCGGAT CGTTGCCGAG
GCCGAGGCCC GTGGTCTGAT CCTGCTGCCC TGCGGCACCC GCGCCAATGT CATCCGCCTT
CTGCCACCCC TGACAACTCC GCTGGCACAG GTGGATGAGG CACTTTCCAT CATCGATCTT
GCGCTTGAAG CGGCGTTTGC CGTCTCGTCC GCCGCCGCTT AG
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| Protein sequence | MGSNAELKAR REHAVAHGVA TRGIYAARAE NAELWDVEGR RYIDFAAGIA VNNTGHRHPR
VMAAVAEQAA AFTHTCFHVA PFEGYIRLAE RLNAATPGDF AKKTMLVTTG AEAVENAVKM
ARAYTGRSGV IAFSGAFHGR TLMGMALCGK VAPYKKGFGA MPPEVYHAPF PNTYHGVTPD
QSLAALEELF RSSIDPDRVA AIIIEPVQGE GGFNIAPASF LRDLRTLADA HGILLIADEV
QAGMGRTGRL FAFEHADVAA DLVTLAKGLA GGFPLSAVTG RAEVVDAAPA GGIGGTYAGN
PIAVAAANAV LDVIAEEELC ARATAIGARI MTHLRTLSDR PGFQAIGDVR GLGAMVAFEL
VTDRAARTPD AALTSRIVAE AEARGLILLP CGTRANVIRL LPPLTTPLAQ VDEALSIIDL
ALEAAFAVSS AAA
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