| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3066 |
|---|
| Symbol | |
|---|
| ID | 3935537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3099512 |
|---|
| End bp | 3100369 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637905437 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511008 |
|---|
| Protein GI | 89055557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0930986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAAG ATAAGAATGA TGTAGGGCCC AAGACAGTCG CGATCCTTGG CGCGGGCGGA
AAAATGGGTG CGCGGATCAC GCGCAAGATC CACGATAGCG CGCATCACCT CGCGGCGATC
GAGATAGCGC CGGAGGGTCG GGACAGGTTA CAGGGTATGG GCATCCCGCT CACCGACGGC
GACGGATGGA TCGACGAGGC GGATGTCGTC GTATTGGCCC TTCCTGACAA CATCATAGAG
AAGGTGGCTG AGGACATCGT GCCTCGGGTC CGCCCCGGAA CGATTGTGCT GATCCTCGAT
GCCGCGGCCC CCTATGCCGG TGTGATGCCC GAGCGTGCGG ACATCACCTA TTTCATCGGC
CACCCGTGCC ATCCCCCCCT GTTCAACGAC GAGACGGACC CCGCCGCGCG AACCGACTAC
CACGGCGGGA TCGCCAAGCA GGCGATTGTC TGCGCGCTCA TGCAGGGTCC GGAAGAGCAT
TACGCCATCG GCGCGGATAT TTGTGAGACG ATGTGGTCGC CCGTCACCCG TACCCACCGC
GTGACGACCG AACAGCTGGC TATCCTGGAG CCCGGCCTTT CCGAAATGGT CGCGATGCCG
TTTGTCGAAA CGATGGTTCA TGCGGTCGAT GAATGTGCCG ACCGCTACGG CATTGATCGG
CAGGCGGCGC TGGATTTCAT GATCGGGCAT CTGAATGTGG AAATCGCCAT GTGGTTTGGC
TACTCGCCCA AAGTGCCCTC TGACGCGGCG TTGCGACTGA TGGAGTTCGC CAAGGACATC
GTGGTGAAAG AGGATTGGCG CGAGGCGCTG AACCCCGCCA AGGTCAAGCA AGCCGCCGAA
CTGATCGCCG GGAAGTGA
|
|---|
| Protein sequence | MVKDKNDVGP KTVAILGAGG KMGARITRKI HDSAHHLAAI EIAPEGRDRL QGMGIPLTDG
DGWIDEADVV VLALPDNIIE KVAEDIVPRV RPGTIVLILD AAAPYAGVMP ERADITYFIG
HPCHPPLFND ETDPAARTDY HGGIAKQAIV CALMQGPEEH YAIGADICET MWSPVTRTHR
VTTEQLAILE PGLSEMVAMP FVETMVHAVD ECADRYGIDR QAALDFMIGH LNVEIAMWFG
YSPKVPSDAA LRLMEFAKDI VVKEDWREAL NPAKVKQAAE LIAGK
|
|---|
| |