| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3043 |
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| Symbol | |
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| ID | 3935514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3070582 |
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| End bp | 3073017 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905414 |
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| Product | nitrite reductase (NAD(P)H) large subunit, NirB |
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| Protein accession | YP_510985 |
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| Protein GI | 89055534 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.301958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC AAAAGCTTGT CGTGATTGGT GCCGGCATGG CCTCGGGCCG GGTGCTGGAG
CATCTGACAG ACGCCGCGCC GGATGCCTTT GACATCACGC TGTTCAACGC GGAGCCGCGC
GGCAATTACA ACCGCATCAT GCTGTCCCCC GTGCTGGCGG GCGATCAGAC CTATGCCGAC
ATCGTCACCC ATGACGAGGC TTGGTACGCG GAACGGGCGA TCACCTGCCG CTTTGGCGAA
AAGGTCTTGG AAATCGACCG GGACGCCAAG ATCGTTGTCG GTGCCAACGG CCATGTGCCC
TACGACCAGC TGATTTTCGG CACTGGGTCG GACCCCTTCA TGATCCCCCT GCCCGGCCAT
GACCTGGACG GCGTGATCGC CTACCGCGAC CTGGAAGATA CGGAGCGGAT GATGGGCCTT
CAACCGGGCC AAAAATGCGT CGTGATCGGC GGTGGCCTGC TGGGATTGGA AGCCGCCGCG
GGCATGGCCG CGCGCGGCGT GGACGTCACG GTTGTCCATA TCATGGGCCA CTTGATGGAG
CGTCAGTTGG ACGAGGCGGC AGGCTACCTG CTGCGCAAGT CCCTGGAGGA CAAGGGGATT
ACGATCTGCC TGCAAGCGAA CTCCAAAGAG ATCGTGGGCA GGGATGGCCA GGTGAAAGCG
CTGATGCTGG ACGACGGCAC GGAGCTGCCC TGCGATCTTC TGGTGATGGC CGTGGGCATC
CGCCCGTCCG TGGCGCTGGC CAAAACCGCC GGGTTGGCCG TGGGCCGAGG CATCCATGTG
GATGACCAGA TGGGCACGTC CGACGGCGCG ATCTTCGCGG TCGGGGAATG CGTGGAGCAT
AACGGCGCGA TCTTCGGCCT TGTGGCGCCG CTTTATGACC AAGCCAGAGT GCTGGCGCAG
ACCCTTTTGG GCGAGAAGGC CGCATTTGTG CAAAAGACGC TATCGACCAA GTTGAAGGTC
ACGGGCTGCG ATCTGTTCAG CGCGGGCGAC TTTGCCGATG GCGAGACCCG CGAGGATATC
GTGTTCCGCG ACCCCGCACG CGGCATCTAC AAGCGACTTG TTATAGAAGA AAACAGGCTC
GTCGGCGCGG TCATGTACGG CGACACCGGC GACGGCAACT GGTTCTTCCA ACTGATCAAA
GACGGCACGG ACATCGAGGA GATGCGCGAG ACGCTGATCT TCGGGCCTTC GATGCAGGGA
GGGCCCGCGC CGGACCCGCT CTCAGCCGTT GCAGCCTTGC CGCGTGATGC GGAGATCTGT
GGCTGCAACG GCGTTTGCAA AGGCATAATC GTGGACGCGA TCGAGGGCGG CGCCGGCGAT
CTGGGCGCGG TACGGGGCGC GACGAAAGCC AGCGCGTCCT GCGGCACATG TACGGGCTTG
GTGGAGCAAT TGCTGCAAGT CACCTTGGGT GACGGGTTCG AATTGCCGAG CGCGCAGCCG
ATCTGCGGCT GCTGCGATCT GACCCATGAG GACGTGCGGC GGCTGATCAA AACCACACCG
CTGAAGTCGC AAGAGGCCGT GTGGCAAGAG CTTGGGTGGA GCACCCGCAA CGGCTGCCAC
GTCTGCCGCC CGGCGGTGAA TTTCTACCTG CTGGCCGACT GGCCGCTGGA GTATCAAGAC
GACCCCCAAA GCCGTTTCAT CAACGAGCGA AAGCACGCAA ATATCCAGAA AGACGGCACT
TTTTCCGTGG TGCCGCGCAT GTGGGGCGGG ATCACCAACC CGTCCGAGCT GCGCGCGATT
GCGGACGCCG CCGATAAATA CAACGTGCCC ACGGTCAAGG TGACGGGCGG CCAGAGGATC
GATCTTCTGG GTGTGAAGGG AGAGGATTTG CCCGGCATCT GGGCGGATCT GAACCGCGCA
GGACTGGTCA GCGGGCATGC GTATTCCAAG GGGTTGCGCA CGGTGAAGAC CTGCGTCGGA
ACGGACCATT GCAGGTTTGG GACGCAGGAC AGCACCGGGC TGGGGATCAA GCTGGAGCAG
GCGCTGTGGG GGTCGTGGAC GCCGCACAAG GTGAAGCTTG GAGTCTCGGG TTGTCCGAGG
AACTGCGCGG AGGCGACGTG CAAGGATATC GGGATTATCT GCGTCGACAG CGGCTATCAG
GTGAGCGTCG GTGGCGCGGC GGGCATGGAC GTGAAGGAAA CGGAGCGGTT GTGCGACGTG
GCCACGGAGG CGGAGGCGAT TGAAGTTACG ATAGCGTTCA CGCAGCTGTA CCGGGAAAAC
GCGAAGTACC TGGATCGGGC CTACAAATGG GTCGCCAAGG TGGGCTTGGA CTGGGTCCAA
GAGCGCGTGG CCGACTTGGA CGAGCGCGCC AGCCTGGTTG CCGCGTTCGA GTTATCGCAA
AGCATTTACC GCAAGGACCC CTGGGCGGAG CATGTCGCGG AGAAGGCCGA GGCGTATCAA
CCGATGGCGG ATCTGACGTT GGAGGCCGCG GAATGA
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| Protein sequence | MAKQKLVVIG AGMASGRVLE HLTDAAPDAF DITLFNAEPR GNYNRIMLSP VLAGDQTYAD
IVTHDEAWYA ERAITCRFGE KVLEIDRDAK IVVGANGHVP YDQLIFGTGS DPFMIPLPGH
DLDGVIAYRD LEDTERMMGL QPGQKCVVIG GGLLGLEAAA GMAARGVDVT VVHIMGHLME
RQLDEAAGYL LRKSLEDKGI TICLQANSKE IVGRDGQVKA LMLDDGTELP CDLLVMAVGI
RPSVALAKTA GLAVGRGIHV DDQMGTSDGA IFAVGECVEH NGAIFGLVAP LYDQARVLAQ
TLLGEKAAFV QKTLSTKLKV TGCDLFSAGD FADGETREDI VFRDPARGIY KRLVIEENRL
VGAVMYGDTG DGNWFFQLIK DGTDIEEMRE TLIFGPSMQG GPAPDPLSAV AALPRDAEIC
GCNGVCKGII VDAIEGGAGD LGAVRGATKA SASCGTCTGL VEQLLQVTLG DGFELPSAQP
ICGCCDLTHE DVRRLIKTTP LKSQEAVWQE LGWSTRNGCH VCRPAVNFYL LADWPLEYQD
DPQSRFINER KHANIQKDGT FSVVPRMWGG ITNPSELRAI ADAADKYNVP TVKVTGGQRI
DLLGVKGEDL PGIWADLNRA GLVSGHAYSK GLRTVKTCVG TDHCRFGTQD STGLGIKLEQ
ALWGSWTPHK VKLGVSGCPR NCAEATCKDI GIICVDSGYQ VSVGGAAGMD VKETERLCDV
ATEAEAIEVT IAFTQLYREN AKYLDRAYKW VAKVGLDWVQ ERVADLDERA SLVAAFELSQ
SIYRKDPWAE HVAEKAEAYQ PMADLTLEAA E
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