Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3006 |
Symbol | |
ID | 3935477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3026271 |
End bp | 3027764 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637905377 |
Product | TniB |
Protein accession | YP_510948 |
Protein GI | 89055497 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.270037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTCC CGGGGACATC GCGCACCTCT CGCCCCCTCG AGATTGTTCA AATCGACCAC AAGAAGGCCG ACATCTTTGC TGTTGATGAG GAAACCGGCA AACCCATCGG ACGGCCCTGG CTGATCCTGG CCATGGACGT CTTCAGCCGC ATGGTGACGG GGTTCTACCT GACAATGGAT GCGCCATCCC GGCTTTCGAC GAGCCTCTGC CTGCTGCACT CGGTCTATGG TAAGACTGCC TGGCTGAAAG CGCGCGAGAT CAATGAACCC TGGGCCGTCG CCGGTCTTCC GGATCGGGTT CATGTGGATA ATAGTGCGGA TTTTCGTAGT CGTGCCTTCA AGCGTGGCTG TGAGAATGCG GGCATTGCCA TAGATTGGCG GCCACCGGGC ACGCCGCGCT TCGGCGGGCA AATCGAGCGT TTAATAGGCA CCCAGATGGG ACGGCTGCAT CTTCTGCCCG GCACGACATT TAGCAATGCC CAAGACCTCG CGGAGTATGA CTCAAAGAAG CATGCGGCGC TGACCTTGCG CGAGTTAGAG CGCTATATCG CTCTTGATAT CGTCGGATCC TATCATCAAT CCATACACAG CTTCCTGAGC CGCCCTCCCC TCGCCGTCTG CCGGGATCGC GAAGGCGAGA TCCCTTTGTG GCTACCGCAG GATCGGCTTC AGTTCTGGGT CTCCTTCCTG CCCGAACAGG AGCGGACCCT GAGGCCGACC GGCATCCATC TGTTTGGTTT GCACTACTGC TCCGCGGCAC TCAGCGCCGA TGTGGGCCGG ACAAAGCGGC GGCTTCTGGT GAAGTATGAT CCGCGCGATA TGTCTCGTGT TTTTGCGCGG CGACCCTCAC GTCGCTGGGT GCTTTACCCG CGCGCCAACC AAGCTCTCAA GCGCCCTGAG GCGCTGCTCG AGCATCCAAG AGGCGCGCGC ATGCCTTCAG TCGCGATCTA TGGTGACAGC GGGATGGGCA AGACCATGGG ACGGTTCCGG GACCAGCACC TCCCAAGCCT TGATAGTCGA ACTGGCATTG TGAACACACC AGTTCTGGCG ATGGAAATGG TCAGCCTCCC AGGAGAGCGG CGGTTCTACG GCGAGCTTCT CAGCCTCCTC GGCGCGCCGC AGGCACCACG GGCCGATATC GCGCTGATGG AACAGGCCTC CCTGCGGATT ATGAAGGCGA TCGGCGTTCA GGTCCTGGTC ATCGACGAGG TTCACAACAT CCTTGCCGGA ACCTACCGAG AACAACGTAT CGTACTGAAT ATGCTGCGCT TCCTCAGCAA TCGGCTTCAG ATATCGCTGG TCTGTTTTGG GGTGAACGAC GCCCGCGAGG CCATTGGCGG GGACGTTCAG CTCGCGCGCC GTTTCGAGCA ACTCACCTTG AACCGTTGGG CCGCCAACGA AGACTTCGAA ACGCTCGTCG CATCGATCCT GCGCAATACT CCCTTGCAGC AACCGTCTGT GCTGACACCT GAATCCCTTC GGCGCATTCT GTAG
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Protein sequence | MPVPGTSRTS RPLEIVQIDH KKADIFAVDE ETGKPIGRPW LILAMDVFSR MVTGFYLTMD APSRLSTSLC LLHSVYGKTA WLKAREINEP WAVAGLPDRV HVDNSADFRS RAFKRGCENA GIAIDWRPPG TPRFGGQIER LIGTQMGRLH LLPGTTFSNA QDLAEYDSKK HAALTLRELE RYIALDIVGS YHQSIHSFLS RPPLAVCRDR EGEIPLWLPQ DRLQFWVSFL PEQERTLRPT GIHLFGLHYC SAALSADVGR TKRRLLVKYD PRDMSRVFAR RPSRRWVLYP RANQALKRPE ALLEHPRGAR MPSVAIYGDS GMGKTMGRFR DQHLPSLDSR TGIVNTPVLA MEMVSLPGER RFYGELLSLL GAPQAPRADI ALMEQASLRI MKAIGVQVLV IDEVHNILAG TYREQRIVLN MLRFLSNRLQ ISLVCFGVND AREAIGGDVQ LARRFEQLTL NRWAANEDFE TLVASILRNT PLQQPSVLTP ESLRRIL
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