Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2942 |
Symbol | |
ID | 3935412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2965029 |
End bp | 2965553 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905312 |
Product | hypothetical protein |
Protein accession | YP_510884 |
Protein GI | 89055433 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000148294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000918436 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCGTGC CGATCAAGAT TTCGCGGGGG ATCCATCTGA TCTCGGCATT CTGGACCATG GGTCTGGCAT TGCTGATCTT TGCGGACGTG ATGGGGCGCC AGCTGTTCGG GGCGCCCGTG CCCGGCACGA AAGAGATCCT GCAAAACTCG GTCGTCACCA TCGCCTTCCT GCAATTGCCG CTTGCGATCT ATTCCGGCTC GATGCTGCGC ACGTCCATCT TCGCCGATGC CGTGCCCGCT CTTGTCCGCC GCCTCCTGCG CACGATCACG GCGCTTCTGG GCATTACCGT CTTCGTGGCC CTGGTCTGGA GCACCAGTGA CAGTTTCCTC GACGCCTACC GCATCGGCGA ATACGAAGGC GAAGGCTCTC TCCGCGTGCC CACCTGGCCC GTGCGCGGCG CGGTTCTGGT GATGTCGGCC TTCGTGGCGC TGGCCTACCT GCACATGATC GTTCTCGATT GGCAGGGCAG GCTCGACAAT GAAATCGAAG CGCCCGGGGC CATCGCGCCC GTGGCCGCAG ACTAA
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Protein sequence | MGVPIKISRG IHLISAFWTM GLALLIFADV MGRQLFGAPV PGTKEILQNS VVTIAFLQLP LAIYSGSMLR TSIFADAVPA LVRRLLRTIT ALLGITVFVA LVWSTSDSFL DAYRIGEYEG EGSLRVPTWP VRGAVLVMSA FVALAYLHMI VLDWQGRLDN EIEAPGAIAP VAAD
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