Gene Jann_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2942 
Symbol 
ID3935412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2965029 
End bp2965553 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID637905312 
Producthypothetical protein 
Protein accessionYP_510884 
Protein GI89055433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000148294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000918436 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCGTGC CGATCAAGAT TTCGCGGGGG ATCCATCTGA TCTCGGCATT CTGGACCATG 
GGTCTGGCAT TGCTGATCTT TGCGGACGTG ATGGGGCGCC AGCTGTTCGG GGCGCCCGTG
CCCGGCACGA AAGAGATCCT GCAAAACTCG GTCGTCACCA TCGCCTTCCT GCAATTGCCG
CTTGCGATCT ATTCCGGCTC GATGCTGCGC ACGTCCATCT TCGCCGATGC CGTGCCCGCT
CTTGTCCGCC GCCTCCTGCG CACGATCACG GCGCTTCTGG GCATTACCGT CTTCGTGGCC
CTGGTCTGGA GCACCAGTGA CAGTTTCCTC GACGCCTACC GCATCGGCGA ATACGAAGGC
GAAGGCTCTC TCCGCGTGCC CACCTGGCCC GTGCGCGGCG CGGTTCTGGT GATGTCGGCC
TTCGTGGCGC TGGCCTACCT GCACATGATC GTTCTCGATT GGCAGGGCAG GCTCGACAAT
GAAATCGAAG CGCCCGGGGC CATCGCGCCC GTGGCCGCAG ACTAA
 
Protein sequence
MGVPIKISRG IHLISAFWTM GLALLIFADV MGRQLFGAPV PGTKEILQNS VVTIAFLQLP 
LAIYSGSMLR TSIFADAVPA LVRRLLRTIT ALLGITVFVA LVWSTSDSFL DAYRIGEYEG
EGSLRVPTWP VRGAVLVMSA FVALAYLHMI VLDWQGRLDN EIEAPGAIAP VAAD