Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2903 |
Symbol | |
ID | 3935371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2923282 |
End bp | 2924148 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637905272 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_510845 |
Protein GI | 89055394 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.199825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC AGCATTCCCG ATCAGCGGCG CGGATCATGA TGGCCCCGGC GGTCTTCCTG CTTCTCGTCT GGATGCTCGT GCCCCTGTGC ATGACGCTGT GGTTCTCGGT CCGCGATTTC CGCCCCCTGC GCGGCGGCGA CAATGGCTTC GTCGGGATGG AGAATTTCAT CCGCTTCGTG TCATCCAGTT CATTCTGGCC GGCTGTCATG ACCACGCTCA TCATCGTGGG CGGTGTTCTT TTGATCTCCA TCTGCCTTGG CGTTCTGCTG GCGATCCTTC TGGATCAGCC GATGTGGGGT CAGGGGGTCG TGCGGATCCT GGTGATCGCG CCCTTCTTCG TCATGCCAAC CGTGTCGGCG CTGGTGTGGA AAAACATGTT CATGGACCCG GTCAACGGCG TCTTCAGCTA CATCTGGCGA TTTTTTGGAG CCGACCCGGT GGTCTGGTTA TCGGAAATGC CAGTCTTCTC CATCGTGATG ATCGTCTCCT GGCAATGGCT GCCGTTTGCG ACGCTGATCC TTCTGACCGC GATCCAGTCG CTGGACAGTG AACAGCTGGA AGCGGCCGAG ATGGACGGGG CCGGGCCGTT TTCCCGCTTT GGCTTCATCA CGCTCCCGCA CCTGAGCCGC GCGATCACCA TCGTGATCCT GATCCAGACG ATCTTCCTGC TGGCCGTCTT CGCCGAAATC TTCGTGACCA CCGGCGGCGC GTTCGGCACC CGGACCCTGA CCTATCTGAT CTACCAGCGC GTACTAGAAA GCCAGAACGT CGGCCTGGGA TCTGCGGGCG GCGTCTATGC CATCATTCTT GCCAATATCG TTGCCATCTT CCTGATGCGC ATCGTCGGCA AAAACCTGGA TAAGTGA
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Protein sequence | MATQHSRSAA RIMMAPAVFL LLVWMLVPLC MTLWFSVRDF RPLRGGDNGF VGMENFIRFV SSSSFWPAVM TTLIIVGGVL LISICLGVLL AILLDQPMWG QGVVRILVIA PFFVMPTVSA LVWKNMFMDP VNGVFSYIWR FFGADPVVWL SEMPVFSIVM IVSWQWLPFA TLILLTAIQS LDSEQLEAAE MDGAGPFSRF GFITLPHLSR AITIVILIQT IFLLAVFAEI FVTTGGAFGT RTLTYLIYQR VLESQNVGLG SAGGVYAIIL ANIVAIFLMR IVGKNLDK
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