Gene Jann_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2888 
Symbol 
ID3935356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2907980 
End bp2909005 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content64% 
IMG OID637905257 
Producthypothetical protein 
Protein accessionYP_510830 
Protein GI89055379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000538932 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.993463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGAAG AGCGGTTTCA CATTGCGGAA TGGTATGGAC ACCCATTCAA GGACCTAGGC 
GACTGGGACC GGGTGAGGCT GGCCGGACAT GACGTGGGCG GCTCGGCAAT GTCGAAGGCA
GAGCTGGCCC GGATGATCGC CCTTGAAGAA AAGGACGCCC TCGGGACCAT CAAGCCCAAG
GAGGCCGACC GGCTCAACGT TCTGCGTAGC AAGCTGGCCC AGCAGCAGGC GGAGGAGCTG
CCGTGTCCGT TTCGCACGGA TAGCCCGCAC CCGACCTGCA CCAAGCCCGG CGGCGTCTGC
TCAATCCGCA TCTATCGCGA GGAGGCCGGG GTCATCGCTC CTATTGACGG GGAACGCGGA
CGGCTGCGCG CCCTCTGTCC TTGGCGGTTC CATCAGGACG GCACCGCCTT CGACAAGATT
GGTGAGAGCC TCCTTGCGGA CCCATCGCCC CTGCGCGCCG GTGAAGTGGG CTTCCTCGAA
TCAACCGGCA ACCTCGACAG CGCAGCAGGC GAGGACGTGG GCCGCATCGA CATGATCCTC
GTCAAGTCGA ACAGCGTGGA CGGCGCGCCG ATGGACTGGG TGGCCGTGGA GGTGCAAGCC
GTCTACTTCT CCGGCAAGAA GATGAGCATC GAGTTTGACC ACCTCAAGCT AACGCAGGGT
AGGCTGTCGA TGGCCCAAGA GAAGCGCCGC CCCGACTACC GCAGCAGCGG GGTCAAGCGC
CTGATGCCGC AGCTCCTGAC CAAGGTTCCA ACCCTCCGAC GCTGGGGCAA GAAGATGGCC
GTGGTAGTCG ATGCGCCGTT TTTCTACTCG ATGGGCAAGA TGGAGCGTGT CCCGCACCTC
TCGAATGCGG ACATTGTCTG GTTCCTCGTT GATTTCAAGC AGGCCGCACC CGGCGCGCCG
TTCCAGCTTG AGGTCGTGGA GGAGTTTTAC ACCACACTTG AGAGCGCCAC CCTCGGGCTG
ACGGGTGGCG TCCCCGTGTC GCAGGGCGCG TTTGAGGCGC GGATCACGGC GAAGGCCCAG
AAATAG
 
Protein sequence
MAEERFHIAE WYGHPFKDLG DWDRVRLAGH DVGGSAMSKA ELARMIALEE KDALGTIKPK 
EADRLNVLRS KLAQQQAEEL PCPFRTDSPH PTCTKPGGVC SIRIYREEAG VIAPIDGERG
RLRALCPWRF HQDGTAFDKI GESLLADPSP LRAGEVGFLE STGNLDSAAG EDVGRIDMIL
VKSNSVDGAP MDWVAVEVQA VYFSGKKMSI EFDHLKLTQG RLSMAQEKRR PDYRSSGVKR
LMPQLLTKVP TLRRWGKKMA VVVDAPFFYS MGKMERVPHL SNADIVWFLV DFKQAAPGAP
FQLEVVEEFY TTLESATLGL TGGVPVSQGA FEARITAKAQ K