Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2868 |
Symbol | |
ID | 3935335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2889862 |
End bp | 2891139 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637905236 |
Product | lytic murein transglycosylase |
Protein accession | YP_510810 |
Protein GI | 89055359 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.387874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATCA CACGGCGAAC ATTTGGGGCG GGTGCAGGGT CTTTGGCCCT GAGCGGCTGT GTCGGCGGCC TTGGCGGCGG GCTCGGTGCT GGGTTGGGCG GCGGGATCGG GACGCCGGGC GATGGCGGGC CGTCCACGGA TCCGGACTTC AGGCCGCAAC CCAATGCCTC CTACGACGCC TGGCTGGACG GCTTTCGGGA TCGGGCGCAG GCGGCGGGGA TCTCGGAGGA TGCCCTGACG CGCGGATTGC GCGGTGTGGG TTACTTGCCT GGCGTGGTCG AACGGGACCG CAATCAAACG GAATTTCGCC GCTCGACCGA GGATTATCTG GCCCTTGTGG CGGGCGACGA CGATGTCAGC CTGGGGCGGT CGCGCTTCAA CGCGCAGCGC AGCGTGCTGG CGGATGTGGA GGCGCGGTAC GGCGTCCCCG CCGAGGTGTG CTGTGCGGTC TGGGGTGTTG AGAGCCGCTA TGGCACGCGG TTGGGGGACA TTCCGGTGAT CTCGGCCGTG TCCACGCTGG CCTGGGAAGG GCGGCGCGGG GACTTCTTTG AAGCGCAGAC CATTGCCGCC CTCCGCATCA TCCAGAATGG CGACACGACC ACCGACCGCA TGCTGGGATC CTGGGCCGGA GCGATGGGGC ATACGCAATT GATTCCAACG ACTTACGAGG AATATGCCGT GGACTTCCGG GGCGATGGGC GGCGCGACAT CTGGACCAAT GATCCCACCG ATGCCTTCGC CTCCACGGCC AGCTATTTCA GCCGGTTCAA CTGGCGCACG GGTCAGCCCT GGGGCATGGA GGTGGAGCTT CCGTCCGGGT TCAGCGCCGC CACCGGGCGC AACAATCGCC GCTCTGTGGC GAGTTGGAGC GGCCTTGGGG TTCGGCGCGC GGGGGGCGGT GCGTTGCCGG ATCATGGGCA AGCGGCCATT CATGCCCCCG GCGGCGCGGG CGCACCTGCA TGGATTTTGT ATCACAATTT CAACGTTATA CTCCGCTATA ACGCCTCCAC CAATTACGGG ATCGGCGTGG GATACCTCTC GGATCGGATC GCGGGCGGTG GGCCGTTGCG GCAGAGTTTC GGGGCCGATG CCAGCGGGCT GACGCAGGCG CAGCGGAGAG AATTACAGGA GCGCCTCAAC AGCGCCGGTT ATGATGCGGG CACGCCCGAT GGGGTCATCG GATCGGGCAC CGAGGCCGCG ATTGAGGCCT ATCAATCGGC CAACGGATTG CCGGTGACCG GAGAGCCCTC GGCGAGCCTT CTGCGGCGAT TGCGGTAG
|
Protein sequence | MRITRRTFGA GAGSLALSGC VGGLGGGLGA GLGGGIGTPG DGGPSTDPDF RPQPNASYDA WLDGFRDRAQ AAGISEDALT RGLRGVGYLP GVVERDRNQT EFRRSTEDYL ALVAGDDDVS LGRSRFNAQR SVLADVEARY GVPAEVCCAV WGVESRYGTR LGDIPVISAV STLAWEGRRG DFFEAQTIAA LRIIQNGDTT TDRMLGSWAG AMGHTQLIPT TYEEYAVDFR GDGRRDIWTN DPTDAFASTA SYFSRFNWRT GQPWGMEVEL PSGFSAATGR NNRRSVASWS GLGVRRAGGG ALPDHGQAAI HAPGGAGAPA WILYHNFNVI LRYNASTNYG IGVGYLSDRI AGGGPLRQSF GADASGLTQA QRRELQERLN SAGYDAGTPD GVIGSGTEAA IEAYQSANGL PVTGEPSASL LRRLR
|
| |