Gene Jann_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2868 
Symbol 
ID3935335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2889862 
End bp2891139 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID637905236 
Productlytic murein transglycosylase 
Protein accessionYP_510810 
Protein GI89055359 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.387874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA CACGGCGAAC ATTTGGGGCG GGTGCAGGGT CTTTGGCCCT GAGCGGCTGT 
GTCGGCGGCC TTGGCGGCGG GCTCGGTGCT GGGTTGGGCG GCGGGATCGG GACGCCGGGC
GATGGCGGGC CGTCCACGGA TCCGGACTTC AGGCCGCAAC CCAATGCCTC CTACGACGCC
TGGCTGGACG GCTTTCGGGA TCGGGCGCAG GCGGCGGGGA TCTCGGAGGA TGCCCTGACG
CGCGGATTGC GCGGTGTGGG TTACTTGCCT GGCGTGGTCG AACGGGACCG CAATCAAACG
GAATTTCGCC GCTCGACCGA GGATTATCTG GCCCTTGTGG CGGGCGACGA CGATGTCAGC
CTGGGGCGGT CGCGCTTCAA CGCGCAGCGC AGCGTGCTGG CGGATGTGGA GGCGCGGTAC
GGCGTCCCCG CCGAGGTGTG CTGTGCGGTC TGGGGTGTTG AGAGCCGCTA TGGCACGCGG
TTGGGGGACA TTCCGGTGAT CTCGGCCGTG TCCACGCTGG CCTGGGAAGG GCGGCGCGGG
GACTTCTTTG AAGCGCAGAC CATTGCCGCC CTCCGCATCA TCCAGAATGG CGACACGACC
ACCGACCGCA TGCTGGGATC CTGGGCCGGA GCGATGGGGC ATACGCAATT GATTCCAACG
ACTTACGAGG AATATGCCGT GGACTTCCGG GGCGATGGGC GGCGCGACAT CTGGACCAAT
GATCCCACCG ATGCCTTCGC CTCCACGGCC AGCTATTTCA GCCGGTTCAA CTGGCGCACG
GGTCAGCCCT GGGGCATGGA GGTGGAGCTT CCGTCCGGGT TCAGCGCCGC CACCGGGCGC
AACAATCGCC GCTCTGTGGC GAGTTGGAGC GGCCTTGGGG TTCGGCGCGC GGGGGGCGGT
GCGTTGCCGG ATCATGGGCA AGCGGCCATT CATGCCCCCG GCGGCGCGGG CGCACCTGCA
TGGATTTTGT ATCACAATTT CAACGTTATA CTCCGCTATA ACGCCTCCAC CAATTACGGG
ATCGGCGTGG GATACCTCTC GGATCGGATC GCGGGCGGTG GGCCGTTGCG GCAGAGTTTC
GGGGCCGATG CCAGCGGGCT GACGCAGGCG CAGCGGAGAG AATTACAGGA GCGCCTCAAC
AGCGCCGGTT ATGATGCGGG CACGCCCGAT GGGGTCATCG GATCGGGCAC CGAGGCCGCG
ATTGAGGCCT ATCAATCGGC CAACGGATTG CCGGTGACCG GAGAGCCCTC GGCGAGCCTT
CTGCGGCGAT TGCGGTAG
 
Protein sequence
MRITRRTFGA GAGSLALSGC VGGLGGGLGA GLGGGIGTPG DGGPSTDPDF RPQPNASYDA 
WLDGFRDRAQ AAGISEDALT RGLRGVGYLP GVVERDRNQT EFRRSTEDYL ALVAGDDDVS
LGRSRFNAQR SVLADVEARY GVPAEVCCAV WGVESRYGTR LGDIPVISAV STLAWEGRRG
DFFEAQTIAA LRIIQNGDTT TDRMLGSWAG AMGHTQLIPT TYEEYAVDFR GDGRRDIWTN
DPTDAFASTA SYFSRFNWRT GQPWGMEVEL PSGFSAATGR NNRRSVASWS GLGVRRAGGG
ALPDHGQAAI HAPGGAGAPA WILYHNFNVI LRYNASTNYG IGVGYLSDRI AGGGPLRQSF
GADASGLTQA QRRELQERLN SAGYDAGTPD GVIGSGTEAA IEAYQSANGL PVTGEPSASL
LRRLR