| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2853 |
|---|
| Symbol | |
|---|
| ID | 3935319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2873417 |
|---|
| End bp | 2874721 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637905220 |
|---|
| Product | phosphonate metabolism PhnM |
|---|
| Protein accession | YP_510795 |
|---|
| Protein GI | 89055344 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG CGCCCGCGAC GCTGTCCCAT CCCAGCCAGG CAGAGCCCGC CGCAAACAGC
GCGCCGTCTG GCACCACATA CAGCCCGTAC CGTTTGAACC CGTCCACTTC ACCCTCCGAG
GTTGCCATGC CTGAGACCCA TCCCATGCCC GAGCCCTTAT GGCCCCGGCC AATGACCCTT
GCCAATGCCC GTCTGATCCT GCCCGACGGT GAGATGCGCG GCCAGATCAC CCTGTCCGAC
GGCAAGATCG CAGAGATCAC CAAAGGCGCC GCCGTGCCCA ACGGGGCCGT GGATTGTGGC
GGGGATATCG TCGCCCCGGG CCTCGTGGAA TTGCACACCG ACAATCTGGA GCGTCACATC
CGCCCCCGTC CGGCGGTCCA CTGGCCCCAC GCCGCCGCCC TGATCGCCCA TGATGCGGAG
ATTGCGTCCT GCGGGATCAC GACGGTCTTC GACGCCATCC GCGTGGGGTC GTTGAAGGCG
AAGGGCGATG CCAGTTGGGT GCGATATGCC CGGGATCTGG CCAATGAGAT GCGCGGGGCG
CGGAAGAACG GCGCGTTTCG GATCAGCCAC CATCTGCACC TGCGGGCCGA GATCTGTTCG
CACACTCTTC TGGAGGAGCT GGAGGAGTTC GGGGTCGAGG ATCGTGTGGG GATCGTCTCG
CTCATGGATC ATACGCCGGG GCAGAGACAA TTCGCCGACC TCAAGCAATA TGAGATCTAC
ATGCGCGGCA AACACGGCCT GTCGCAGGGC ACGTTTGAGG AGCATGTGCG CACGCGGATC
GCGCTGGGGG ACGAGGTGCG CGACGATCAT GAGGCCGCCG CCGTGGCCGC CGCCCACCGC
TTTGGCGCGG CGATGGCAAG CCACGATGAC ACCACGCCGG ATCATGTCGC GCGCTCCAAG
CACCATGGCG TGGCGCTGGC CGAGTTTCCG ACGACCCGTG TGGCGGCCGA GGCCTGCCGG
GACGCGGGGA TCGCCGTGAT GATGGGCGCG CCGAACCTGA TCCGGGGCGC GTCGCATTCC
GGCAATGTTG CGGCGGGTGA ATTGGCGGAG GCGGGGCTGT TGGACATCCT GTCGTCAGAC
TACGTGCCGT CGGCCCTGTT GTTCTCCGCC GTCCGGTTGG GCGCGCTTTG GGGCGACATG
GCCCGCGCCA TGGCCACGGT CACAACGACG CCCGCCCGTG CCGCAGGTCT GACGGATCGG
GGGGCTCTGG CCGTGGGGCA ACGGGCGGAT GTCATTCGCT TTCGCACGAT GGACGGCGTG
CCGGTGCTGC AATCGGTCTG GTCGGCGGGG CGGCGTGCGG CCTAG
|
|---|
| Protein sequence | MTDAPATLSH PSQAEPAANS APSGTTYSPY RLNPSTSPSE VAMPETHPMP EPLWPRPMTL
ANARLILPDG EMRGQITLSD GKIAEITKGA AVPNGAVDCG GDIVAPGLVE LHTDNLERHI
RPRPAVHWPH AAALIAHDAE IASCGITTVF DAIRVGSLKA KGDASWVRYA RDLANEMRGA
RKNGAFRISH HLHLRAEICS HTLLEELEEF GVEDRVGIVS LMDHTPGQRQ FADLKQYEIY
MRGKHGLSQG TFEEHVRTRI ALGDEVRDDH EAAAVAAAHR FGAAMASHDD TTPDHVARSK
HHGVALAEFP TTRVAAEACR DAGIAVMMGA PNLIRGASHS GNVAAGELAE AGLLDILSSD
YVPSALLFSA VRLGALWGDM ARAMATVTTT PARAAGLTDR GALAVGQRAD VIRFRTMDGV
PVLQSVWSAG RRAA
|
|---|
| |