Gene Jann_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2842 
Symbol 
ID3935308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2859727 
End bp2860107 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content62% 
IMG OID637905209 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_510784 
Protein GI89055333 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.810937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.282987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCT CGGTCCTGGC CATTGACGAT TCCCGAACCA TGCGGAACCT GCTGAGCGCA 
GCCTTGGGCC GCGTCGGCTA CGACATCGAC CTTGCCGAAG ACGGCAGCGA GGGGTTGGAC
CGGTTCAACA AGACCGACCC CGATGTGGTG ATTACCGATA TCAACATGCC GAACCTTGAT
GGGTTCGGGT TCATTGAGGC GGCGCGGAAA TTGCCGCGAG ACCGATTGGT GCCCATCCTC
GTCCTGACAA CGGAAACAGC GCCGGAACTG CGCGCGCGCG CCCGAAAGGC CGGCGCGACC
GGTTGGATCG TGAAGCCGTT CGACGATGAA AAGCTCGTCT GGGCGATCGA GCGTGTGGCC
AATACCGGAG GCGCGGCATG A
 
Protein sequence
MSLSVLAIDD SRTMRNLLSA ALGRVGYDID LAEDGSEGLD RFNKTDPDVV ITDINMPNLD 
GFGFIEAARK LPRDRLVPIL VLTTETAPEL RARARKAGAT GWIVKPFDDE KLVWAIERVA
NTGGAA