Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2840 |
Symbol | |
ID | 3935306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2857030 |
End bp | 2857497 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637905207 |
Product | CheW protein |
Protein accession | YP_510782 |
Protein GI | 89055331 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.437722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.122347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCAAG TTGAAACTGA CCAGCACGCC AAGCACCACG AGGTCGTCGC GTTTCGCGTG GCCGAGCAAG ATTTTTGTTT CGACATCATG TCCGTGCGCG AGATCAGAGG ATGGACCGAA ACGACGACGC TGCCCCACGC CCAGAGCTAT GTGAAAGGCG TGATCAATCT GCGCGGCTCG GTTGTGCCGG TTGTCGACCT GTCGGACCGC CTGGGCTTTG GTCCAACGCA GGCCTGCGCC CGGCACGTGA TCATCATCAC GGTTGTGGAG GGCCAGACGA TTGGCCTTCT GGCCGATGTC GTGTCCGATA TCCTCGCAGT GTCTGATGAT AGTATGCACC CGGTCCCGGA CATGGTGTCA GATCAGGTGA AGTCTTTTAT CTCGGGCGTC GTGTTGATCG ATGAACGGAT GATCCGCCGG TTGGACCTGT CCAGCGTCGT CCCGAAGACG ACGTTGGAAG CTGCATGA
|
Protein sequence | MSQVETDQHA KHHEVVAFRV AEQDFCFDIM SVREIRGWTE TTTLPHAQSY VKGVINLRGS VVPVVDLSDR LGFGPTQACA RHVIIITVVE GQTIGLLADV VSDILAVSDD SMHPVPDMVS DQVKSFISGV VLIDERMIRR LDLSSVVPKT TLEAA
|
| |