Gene Jann_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2840 
Symbol 
ID3935306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2857030 
End bp2857497 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID637905207 
ProductCheW protein 
Protein accessionYP_510782 
Protein GI89055331 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.437722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.122347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAG TTGAAACTGA CCAGCACGCC AAGCACCACG AGGTCGTCGC GTTTCGCGTG 
GCCGAGCAAG ATTTTTGTTT CGACATCATG TCCGTGCGCG AGATCAGAGG ATGGACCGAA
ACGACGACGC TGCCCCACGC CCAGAGCTAT GTGAAAGGCG TGATCAATCT GCGCGGCTCG
GTTGTGCCGG TTGTCGACCT GTCGGACCGC CTGGGCTTTG GTCCAACGCA GGCCTGCGCC
CGGCACGTGA TCATCATCAC GGTTGTGGAG GGCCAGACGA TTGGCCTTCT GGCCGATGTC
GTGTCCGATA TCCTCGCAGT GTCTGATGAT AGTATGCACC CGGTCCCGGA CATGGTGTCA
GATCAGGTGA AGTCTTTTAT CTCGGGCGTC GTGTTGATCG ATGAACGGAT GATCCGCCGG
TTGGACCTGT CCAGCGTCGT CCCGAAGACG ACGTTGGAAG CTGCATGA
 
Protein sequence
MSQVETDQHA KHHEVVAFRV AEQDFCFDIM SVREIRGWTE TTTLPHAQSY VKGVINLRGS 
VVPVVDLSDR LGFGPTQACA RHVIIITVVE GQTIGLLADV VSDILAVSDD SMHPVPDMVS
DQVKSFISGV VLIDERMIRR LDLSSVVPKT TLEAA