Gene Jann_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2832 
Symbol 
ID3935298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2849080 
End bp2849814 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID637905199 
Productshort chain dehydrogenase 
Protein accessionYP_510774 
Protein GI89055323 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0580098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.214495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC CGGTCCTGAT CCTTGGCGCG AAATCGGACA TCGCGCGCGC CGTGGCACGG 
TCCTTCGCCG AAGCCGGTCA CCCGATCCAG CTGGCCGCCC GCGATGTGGC GCGCCTAGAA
GACGACGCCG CAGATCTGCG CACCCGCTTC GGCGTCGAGG TCACGCTGCA CGACTTCGAC
GCGTTAACCA TCGAATCACA TGGAGACTTC GTCACAGGCC TCCCCGCCCT GCCCGAGGTC
GCCGTCTGTG CCGTCGGCGC GATGGGCACC CAGGAGGGCA GCGAAGCCGA CCCAATGGCC
GCCGCCCACG TCATGCGGTC CAATTTTGAG GGGCCCGCAT CCGTGATGGC GCATCTGGCC
AACGCGATGG AGGCGCGCGG ATCGGGCACG TTGGTGGGCA TCTCATCGGT CGCAGGCGAT
CGGGGTCGCG CCTCCAACTA TGTCTATGGA TCGGCGAAGG CGGGCTTCAC CGCGTTCCTG
TCCGGCCTGC GCAATCGCCT TGCAAAAAAG GGCGTACACG TCATCACCGT GCTGCCGGGC
TTTGTCAAAA CCGCGATGAC AGAGGGCATG GACACGCCCG GTCCGCTGAC TGCCGAGCCG
GAGGAGGTGG GAGCGGCGAT CCTGAACGCG GTGAAGAAAG GGACAAACGT GATCTACACG
CGGTCCATCT GGCGCATCGT CATGGCGGTG ATCCGGAATA TCCCCGAGCC GATCTTCAAG
AAGACCTCCA TCTGA
 
Protein sequence
MSGPVLILGA KSDIARAVAR SFAEAGHPIQ LAARDVARLE DDAADLRTRF GVEVTLHDFD 
ALTIESHGDF VTGLPALPEV AVCAVGAMGT QEGSEADPMA AAHVMRSNFE GPASVMAHLA
NAMEARGSGT LVGISSVAGD RGRASNYVYG SAKAGFTAFL SGLRNRLAKK GVHVITVLPG
FVKTAMTEGM DTPGPLTAEP EEVGAAILNA VKKGTNVIYT RSIWRIVMAV IRNIPEPIFK
KTSI