Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2832 |
Symbol | |
ID | 3935298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2849080 |
End bp | 2849814 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637905199 |
Product | short chain dehydrogenase |
Protein accession | YP_510774 |
Protein GI | 89055323 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0580098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.214495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC CGGTCCTGAT CCTTGGCGCG AAATCGGACA TCGCGCGCGC CGTGGCACGG TCCTTCGCCG AAGCCGGTCA CCCGATCCAG CTGGCCGCCC GCGATGTGGC GCGCCTAGAA GACGACGCCG CAGATCTGCG CACCCGCTTC GGCGTCGAGG TCACGCTGCA CGACTTCGAC GCGTTAACCA TCGAATCACA TGGAGACTTC GTCACAGGCC TCCCCGCCCT GCCCGAGGTC GCCGTCTGTG CCGTCGGCGC GATGGGCACC CAGGAGGGCA GCGAAGCCGA CCCAATGGCC GCCGCCCACG TCATGCGGTC CAATTTTGAG GGGCCCGCAT CCGTGATGGC GCATCTGGCC AACGCGATGG AGGCGCGCGG ATCGGGCACG TTGGTGGGCA TCTCATCGGT CGCAGGCGAT CGGGGTCGCG CCTCCAACTA TGTCTATGGA TCGGCGAAGG CGGGCTTCAC CGCGTTCCTG TCCGGCCTGC GCAATCGCCT TGCAAAAAAG GGCGTACACG TCATCACCGT GCTGCCGGGC TTTGTCAAAA CCGCGATGAC AGAGGGCATG GACACGCCCG GTCCGCTGAC TGCCGAGCCG GAGGAGGTGG GAGCGGCGAT CCTGAACGCG GTGAAGAAAG GGACAAACGT GATCTACACG CGGTCCATCT GGCGCATCGT CATGGCGGTG ATCCGGAATA TCCCCGAGCC GATCTTCAAG AAGACCTCCA TCTGA
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Protein sequence | MSGPVLILGA KSDIARAVAR SFAEAGHPIQ LAARDVARLE DDAADLRTRF GVEVTLHDFD ALTIESHGDF VTGLPALPEV AVCAVGAMGT QEGSEADPMA AAHVMRSNFE GPASVMAHLA NAMEARGSGT LVGISSVAGD RGRASNYVYG SAKAGFTAFL SGLRNRLAKK GVHVITVLPG FVKTAMTEGM DTPGPLTAEP EEVGAAILNA VKKGTNVIYT RSIWRIVMAV IRNIPEPIFK KTSI
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