| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2822 |
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| Symbol | |
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| ID | 3935288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2836605 |
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| End bp | 2838158 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905189 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_510764 |
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| Protein GI | 89055313 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.687608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0566169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TATTCACTGC CAGCGTGCTG GCCATGGCCA CCGCGATCCC GGCCCAGGCC
GAAACCTTCC GGTGGGCCGC CACGACCGAC CCGCAGACCA TGGACCCCCA CGCGGTGTCC
TCCGCCCCGG TTCTGGGGTT CCTGAACAAC GTCTATGAGG GCCTCGTGCG GCGCGGCCGC
GACATGTCCA TCGAACCCGC TTTGGCCGAG GCGTGGGAAC CACTGCCCGA CGGCGCGGGT
TGGCGCTTCA CCCTGCGCCA GGGCGTGACC TTCCATGATG GCGCGGCCTT CAACGCCGAT
GACGTGCTGT TCTCCTACGA GCGCGCCAGT TCCGAGGACA GCGACGTGGC CAGCTGGTTC
GCCACCGTCT CGGGCGTCGA GATCGTGGAT GAGTTCACCG TCGATATCCT GACAACGACG
CCGCAGCCGA TCTTTCCCGA CAGCATCGCC AACTGGATGA TGATGGACAG CGACTGGGCC
GCCGCCAATG GCGCGGAACG TCCCGCCCGC GATGCGGAGA ATTTCGCGAC CCGCAACGTC
AACGGCACCG CCGCGTTCAT GCTGCAATCG CGCCAGCCCG ATCTGGAGAC TGTCCTTGTC
CCCTTCGACG GCTGGTGGGG CGAGGTCGAG CATAATGTGA CCGAGGCGAT CTTCACGCCG
ATCCAGAACT CCGCCACCGC CGTGGCCGCG TTGCTTTCGG GCGATATCGA CCTGATCGAC
CCGGTGCCGG TCCAGGACGC GGACCGCGTG GACGCCGCTG ACGGCGTCTA TGTCCTGTCG
GGGATCGAGG CGCGGGTGAT CATGTTGGGC TACGGCCACG ACCATGAGAC GCTTCTGAAC
GGCAACGACA ACATCTTCTC GGATGTGCGT GTGCGTCAGG CCGTGGCCCA CGCCGTCAAT
GTCCCCGCGA TCCTGCAAGC GATCATGGGC GGCAACGCGG AGGAGGCGAG CCAATTGGTG
AGCCCAGCCA TGCGCGGCTA TTCCGAGGCC CGCGCAGACC GGCCCGCCTT TGATCAGGAT
CTGGCGCGGT CCCTGATTGC CGAGGCCGGG GCAGAAGGCG CCGAGTTCAA CCTGTCCTGC
CCCAATGACC GATACCTCAA TGATGAGGCC GTCTGTCAGG CCATCGTCGG CATGCTGGCC
CAGGTCGGCC TGAATGCGCA GCTGGAGACG ATGCCGGTCA GCAATTACTG GCCCGAGCTG
CGTGCCGACA ATTACGACAT GTACCTTCTC GGTTGGTCAC CTGGCACGTT CGATGCCGAG
CATCCGCTGC GCTTCCTTGT TCACACCAAT ACTGAGAACC TCGGGACGTG GAACTTCGGC
GGATATTCCA ACCCCCGCAT CGACGAGATG CTGCCGCTGA TCCAGTCCGA GATTGACGAA
GATGCGCGTC AGGCCATGCT GGATGAGGCC GCGGCCATCG TGCAGGACGA TGCGGTCTAC
AACACGATGT ATGTCCAGCC TCTGCTCTGG GGTGTGGCCA ATGGCATCGA GCTGACCCAG
CGCCCCGACA ACTTTTTCAT CCTGCGGTGG GTGACGGTCG GGGCCGAAAA CTAG
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| Protein sequence | MNRLFTASVL AMATAIPAQA ETFRWAATTD PQTMDPHAVS SAPVLGFLNN VYEGLVRRGR
DMSIEPALAE AWEPLPDGAG WRFTLRQGVT FHDGAAFNAD DVLFSYERAS SEDSDVASWF
ATVSGVEIVD EFTVDILTTT PQPIFPDSIA NWMMMDSDWA AANGAERPAR DAENFATRNV
NGTAAFMLQS RQPDLETVLV PFDGWWGEVE HNVTEAIFTP IQNSATAVAA LLSGDIDLID
PVPVQDADRV DAADGVYVLS GIEARVIMLG YGHDHETLLN GNDNIFSDVR VRQAVAHAVN
VPAILQAIMG GNAEEASQLV SPAMRGYSEA RADRPAFDQD LARSLIAEAG AEGAEFNLSC
PNDRYLNDEA VCQAIVGMLA QVGLNAQLET MPVSNYWPEL RADNYDMYLL GWSPGTFDAE
HPLRFLVHTN TENLGTWNFG GYSNPRIDEM LPLIQSEIDE DARQAMLDEA AAIVQDDAVY
NTMYVQPLLW GVANGIELTQ RPDNFFILRW VTVGAEN
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