Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2819 |
Symbol | |
ID | 3935285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2832541 |
End bp | 2834130 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905186 |
Product | extracellular solute-binding protein |
Protein accession | YP_510761 |
Protein GI | 89055310 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000112764 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.172306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC GACTATTCGC GATCACCGCG ACCCTTCTGG CCACCACGGC CATCACCGCC ACATCGCTAT CGGCCGAGAC GCTGCGATGG GCGCGCGCCG CCGAGGCGCT GACGCTGGAT CCGCATTCCC AGAACGAAGG GCCGACCACG ACCCTCATGC ACCAGATCTA CGACCCCCTC ATCGTGCGCA ACATGGCCGG TGAGATGGAA CCCTCGCTCG CCACCGAATG GGCCCCGTCC GAGGACAACC CCAACGTCTG GGTCTTCCAG ATCCGCGAAG GCGTGACCTT CCATGGCGGC GAAAGCTTTG ACGCCTCCGA CGTCGTCTTC TCGCTCAACC GCGCGATGCA GGAGGCCTCG AACTTCAAGG AATTGCTGTC CGGCGTCGTT GAGGTCCGCG CCACGGGTGA TTTCACCGTC GAGATTGAAA CCGAAGGCCC CAACCCGCTG CTGGCCAACA ACCTGACCAA CATCATGATC ATGGATGAGG GTTGGACCGT CGAAAACGGC GCTGAAAACG TGCAGGATTA TGCCGCAGGC GAAGACACGT TCGCCGCGCG CAACGTCAAC GGCACCGGCG CATTCGTGCT GCAAAGCCGG GAGGCTGACG TGCAGACCGT GCTGACCCAG AACCCCGATT ACTGGGGCAT CGGTCAGTTC CCGATGGATG TGACCGAGAT CATCTTCACC CCGATCCAGA ACCCCGCCAC GCGCCTCGCG GCCTTCCTGG GCGGCGAAGT CGACTTCATC CAGGACGTGC CTGTGCAGGA TCTGGAGCGG GTCGAGGCCG CCGACGGCAT CGGTCTGGGC ACCGGACCGC AGAACCGCAA CATCTTCTTC GGCCTCAATG TCGGCGCCGA TGATCTGGAG CGCGACAACG TGGACGGGGA AAACCCGCTG GCCAATCCCA TGGTCCGGGC CGCGATGAAC CTCGCCATCA ACCGCGAGGC GATCCAGCAG GTCGTCATGC GGGGCCAGTC CGATCCCACC GGCGCAATGC TGCCTCCGCC CGTCAACGGC TGGACCGAGG ATCTGGAAGC CTACCCAGCC TATGACGTGG CCGCAGCCCA GGCGCTGATG GATGAGGCAG GCTATGGCGA CGGCTTCTCG ATCCAGCTCG ATTGCCCCAA TGACCGCTAC GTCAACGACG AATCGATCTG CCAGGCGGCC GTGGGCATGT TCGCCCAGAT CGGCATCACG GTGAACCTGT CCGCCCTGCC CCGCGCCCAG CATTTCCCGC TGATCGCCAA TGGCGAAACG GACCTGTACA TGCTGGGGTG GGGCGTGCCG ACATATGATT CCGAGTATGT CTTCAACTTC CTCTACCACA CCCGCAACGA AGGCCGTGGA AGCTGGAACG GCACCGGCTT CTCCAACGCC GCGATGGACG ACATGATCGT GTCCCTGTCG TCGGAGACGG ATCTTGAGGC CCGCGATCAG ATCATCGCCG ATCTCTGGAC CATGGCCACC GCCGAGCAGA TCTACCTGCC CATCCACCAC CAGGTCCTCA ACTGGGGCAT CTCCGATGCC TGGAGCACGC TGGTGGACGC CGACGATCAG GTGAAGTTCA AGTATTTTGA ACTGAACTGA
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Protein sequence | MTNRLFAITA TLLATTAITA TSLSAETLRW ARAAEALTLD PHSQNEGPTT TLMHQIYDPL IVRNMAGEME PSLATEWAPS EDNPNVWVFQ IREGVTFHGG ESFDASDVVF SLNRAMQEAS NFKELLSGVV EVRATGDFTV EIETEGPNPL LANNLTNIMI MDEGWTVENG AENVQDYAAG EDTFAARNVN GTGAFVLQSR EADVQTVLTQ NPDYWGIGQF PMDVTEIIFT PIQNPATRLA AFLGGEVDFI QDVPVQDLER VEAADGIGLG TGPQNRNIFF GLNVGADDLE RDNVDGENPL ANPMVRAAMN LAINREAIQQ VVMRGQSDPT GAMLPPPVNG WTEDLEAYPA YDVAAAQALM DEAGYGDGFS IQLDCPNDRY VNDESICQAA VGMFAQIGIT VNLSALPRAQ HFPLIANGET DLYMLGWGVP TYDSEYVFNF LYHTRNEGRG SWNGTGFSNA AMDDMIVSLS SETDLEARDQ IIADLWTMAT AEQIYLPIHH QVLNWGISDA WSTLVDADDQ VKFKYFELN
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