| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2786 |
|---|
| Symbol | |
|---|
| ID | 3935250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2803977 |
|---|
| End bp | 2805422 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905151 |
|---|
| Product | OmpA/MotB |
|---|
| Protein accession | YP_510728 |
|---|
| Protein GI | 89055277 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.187099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG CTCTACCGAC CCTCGCCGTC GCCAGTTTTT GTCTTGCCGC CCATGGCGCT
TTGGCACAGT CGACGCCCCC GGGAACCTCG TTGACGGTTA CCGACAGCCG CGGTGCTGAC
ATCGTGTTTC CGCTTGGACT TGCCTCCTTC GCGGATGCGG TGATCAGCTA CGCGCCGGGC
AGTGATATCC CGAGCGAGGC CGCCCGCAAT CCCGCGCAGG TGCTGGGCTT TCCGGATTAC
GCGGGTGGCG ATCAGGGTAC GTTTGTGACC CTGGGTTGCG GCGGACAGGC GGTCTGGGCG
TTCACCGACA ACGCGCTGGT CGATGTCGAC GGCCCGGACC TTTGGATATT CGAAGTTGGG
CCAGACGTGG AGGGGATGGC GGTGGCCGTG TCCGCCGATG GGACCACATG GCTAGACGTG
GGGAGTGTTG CGGGGTCAAC CTCAACGGTG GATCTGGCCG GATATGCGCC CGCCGGGGCC
AGCTATCGCT TCGTGCGCCT GACCGATGAT GGGGTGCAAT GCTCGGGCCG CACGCCGGGC
GCGGATGTGG ATGCGATCGG TGCCATCGGC GCGATTGAGC GGATCGCCTT GGATCTGCCC
CCGACCTCTG ACACGACGGC CTATGATGAT ACGCGTGGCA GTCAGGTGCA GTTTCCGGCA
GGCGATATCA GCTTTGCCGA TGCCGTTGTC AGCTACACGC CCGGATCGAC CATTGAAGCG
CCAGGCGTTG ATGACCCGTC CCTTGGTCTC CATGCTCCGG ACTATGTTGG CAATGGCGTA
CCTCTGGCGG TGACCCTGGG CTGCGGCGGG CAGGTCGTGT ACCAGTTCAT CGACAACACC
CTGATCGACG TGCCCGGCGC GGATCTTTTC ATTTTCGAGG TTGGTCCCGA TGTGGAGGGC
ACGATCCTCG CCATTTCCGG CGATGGGGTC AGCTGGACGG ATATCGGTGC CATCGAAGGG
GCGACGGCCC AGATCGACAT CGCACCCCAC ATTCAACCCG GCGAGACCTT CCAGTTCGTG
CGTCTGACCG ATGGCGGCTT GCAATGCAGC GGGCGGTTCC CGGGGGCCGA CATTGATGCG
GTGGGGGCAA TCGGCTCTGC CACGCGGCTG GTGCTGGACG CAAACCTGCT GTTTGATTTC
GACAGCGCGA CGCTGCGTCG CGCCGGTCTT CAGGCCGTGT CCGAATTGGC CGCTGCCATC
CGGTCGGGGC AGGTGTCGCA GGTCATCGTG GACGGGCACA CCGATGCGGC AGGCTCGGAC
GCCTATAACC AGACCCTCTC GCAGGAGCGC GCCGTTGCGG TGGCGCAGGC GCTGATGGTG
CAGGGCGTGG CGCAAGGGCT GTTGACGACG CGGGCGTTCG GAGAGAGCCG TCCGGTGGCC
GACAATGGGT CGGAGGCCGG TGCACAGCAA AACCGCCGGG TCGAGGTTCT CTTGATCGGC
GGCTGA
|
|---|
| Protein sequence | MRYALPTLAV ASFCLAAHGA LAQSTPPGTS LTVTDSRGAD IVFPLGLASF ADAVISYAPG
SDIPSEAARN PAQVLGFPDY AGGDQGTFVT LGCGGQAVWA FTDNALVDVD GPDLWIFEVG
PDVEGMAVAV SADGTTWLDV GSVAGSTSTV DLAGYAPAGA SYRFVRLTDD GVQCSGRTPG
ADVDAIGAIG AIERIALDLP PTSDTTAYDD TRGSQVQFPA GDISFADAVV SYTPGSTIEA
PGVDDPSLGL HAPDYVGNGV PLAVTLGCGG QVVYQFIDNT LIDVPGADLF IFEVGPDVEG
TILAISGDGV SWTDIGAIEG ATAQIDIAPH IQPGETFQFV RLTDGGLQCS GRFPGADIDA
VGAIGSATRL VLDANLLFDF DSATLRRAGL QAVSELAAAI RSGQVSQVIV DGHTDAAGSD
AYNQTLSQER AVAVAQALMV QGVAQGLLTT RAFGESRPVA DNGSEAGAQQ NRRVEVLLIG
G
|
|---|
| |