| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2763 |
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| Symbol | murD |
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| ID | 3935227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2777317 |
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| End bp | 2778699 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905128 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_510705 |
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| Protein GI | 89055254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.935221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTG TAGGCCGAAA AGTGGTGGTT CTGGGTCTTG GCCGATCCGG TCTCGCGTCG
GCACGCGCAT TGCGTGAGGG CGGGGCCGAG GCGCTGTGCT GGGATGATGG TGAGGCCGGA
CGTGCCCGTG CGGCGGCTGA AGGCTTCACG ATCCATGACC CCATCCGGGA CGGATTGGAC
GGCGTTGCCT GCCTGGTCAC ATCGCCCGGT ATTCCCCACC TCTACTCGAC CCCCCATCGT
GCCATTGTGG CGGCCTATGC GGCGGGCGTG CCGGTGGACA ACGACATTGG TCTGTTCTTC
CGGTCCCTGG GGCAGGGGGA TTGGGCGTTC CATGACACGC CCCCGCGCGT TGTTGCGGTG
ACGGGATCCA ACGGGAAATC TACGACCTCT GCCCTGATCG CGCATATTCT GGAGGAGGCG
GGCACGCCGG TTCAACTGGC GGGCAACATC GGGCGCGGTG TCTTGGACAT CGAGCCGCCG
ATTGATGGAG AGGTCATTGT GATCGAGCTG TCGTCCTACC AGACGGAACT GGCCCGTGCC
CTGACGCCCG ACATCGCGGT CTTCACCAAT CTCTCGGCCG ATCATCTGGA ACGCCACGGT
GGCATGGGCG GGTATTTCGC GGCCAAACGA CGTCTGTTTT CCGAAGGCGG ACCGGAGCGG
GCCGTGATTG GCGTCGATGA GATCGAAGGC CAATATCTGG CTGGTCAATT GGTGGAGGGG
CCGGAAGATG GGCGGCTGAT CCGCGTCTCC TCCGGTAAGC TGAGCGGTCC GGGTTGGGAT
GTTAGCACGC GCAAGGGGTG GCTGAGCGAG TTTCGAAAGG GTCGCCAGGC GGCCTCCATC
GATCTGCGCG GTGTGCCGGG ATTGCCCGGT GCTCACAACC ACCAGAACGC GGCCTGCGCC
TACGGCGTCT GTCGGGCCCT TGGTCTGGCC CCCCGGGTGA TCGAGGCGGC ATTCGCCACG
TTTGAAGGGC TGCCCCACCG CTCCCAGCGC GTTGCCGAGA TCAACGGCGT ATTTTACGTC
AACGACAGCA AGGCCACCAA TGTGGACGCG GCAACCAAGG CCCTGGGCGC GTTCAAACGC
ATCCGTTGGA TCTGTGGCGG GTTGGAAAAG GACGGCGGGT TGGAAGCGCT GTGGGAGGCC
GCAGGCCATG TCGCCAAGGC CTACGTGATT GGGCGCGAGG CGGAGGCCTT TGCGCTGCAT
CTGGGCGATA TTCCCAAAGA CGTCTGCGGC GACATGGCCA CGGCCGTTGC ACGCGCGTCG
GCTGATGCAC AGCCGGGCGA TACGGTGCTT CTGGCCCCCG CCGCCGCCAG CTTCGACCAA
TATGACAGCT TTGAGACGCG CGGCGCGGAT TTCATCGCAC AGGTGGAAAA GCTGCAAAGC
TAG
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| Protein sequence | MGFVGRKVVV LGLGRSGLAS ARALREGGAE ALCWDDGEAG RARAAAEGFT IHDPIRDGLD
GVACLVTSPG IPHLYSTPHR AIVAAYAAGV PVDNDIGLFF RSLGQGDWAF HDTPPRVVAV
TGSNGKSTTS ALIAHILEEA GTPVQLAGNI GRGVLDIEPP IDGEVIVIEL SSYQTELARA
LTPDIAVFTN LSADHLERHG GMGGYFAAKR RLFSEGGPER AVIGVDEIEG QYLAGQLVEG
PEDGRLIRVS SGKLSGPGWD VSTRKGWLSE FRKGRQAASI DLRGVPGLPG AHNHQNAACA
YGVCRALGLA PRVIEAAFAT FEGLPHRSQR VAEINGVFYV NDSKATNVDA ATKALGAFKR
IRWICGGLEK DGGLEALWEA AGHVAKAYVI GREAEAFALH LGDIPKDVCG DMATAVARAS
ADAQPGDTVL LAPAAASFDQ YDSFETRGAD FIAQVEKLQS
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