Gene Jann_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2738 
Symbol 
ID3935202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2751573 
End bp2752526 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID637905103 
Productthreonine dehydratase 
Protein accessionYP_510680 
Protein GI89055229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC CAAATTCAGA TGCCATCTCG GCTGCCGCCC CGCTGATCGC GCCCCATATC 
CGCACAACCC CGATTCTGAC CGTTGAAGCG GCTGCGCTAT CGCTCCCTGT TCCGATCACG
CTGAAGCTGG AGCACACTCA GATCACCGGC TCGTTCAAAC TGCGCGGCGC GTTCTACAAC
ATGCTGACCC GCGATGTGCC CGCGGCTGGT GTCGTTGCGG CCTCCGGCGG GAACCACGGC
GCGGCTGTGG CCTATGCGGC CACGGCGCTG GGGCATAAAA GCCGCATCTT CGTGCCCGCC
ACCATCGCCA AGGAAGAAAA ACTCAAACGG ATGAGGGATT TCGGGGCAGA GGTCGTCCTG
ACCGAAGGCT CTGTCGGGGC CTGTATGGAG GACTACGCGG CCTACGCCGA GACGTCCGGC
GCGCTCTCTG TCCATCCCTA CGATACGATC CCCACGTTGA CGGGCCAGGG CACGCTCGCG
CGCGAAATCG AACAGCAGAT GACGGAAGCC GATCTGGGCG GCATCGACAC CATCCTCGTC
TCGACCGGGG GCGGCGGGCT GATTGGCGGT ATCTCCGCGT GGTTCCGCGA CCGGATCAAG
GTCGTCTCGA TCGAGACAGA AGGGACAAAT ACGCTAGAGA GATCCCTGCG GGAGGGACCG
GATCTCGACG TGCCCGCCAG CGGGATTGCG GCGGGATCAC TGGGGGGGCC GCGCCTGGGG
ATCGACAGCT ACGCGTTGAT CAAGGCCTTC GTGGATGAGG CGATCATCTT ACCCGACACA
GAGGTTTTCA CCGCCGCCAA GCGATTGTGG GACGGCACGC GCCTGATCGG AGAGCCCGGC
AGCGCCGTGG CCCTCGCCGC CCTCACCTCC GGCGCTTACG TGCCCGAAAA GGACGAACGC
GTCTGCGTGG TCCTTTGCGG CGGCAATGCA GAGCCCGATT GGTTCGCGAC ATGA
 
Protein sequence
MIHPNSDAIS AAAPLIAPHI RTTPILTVEA AALSLPVPIT LKLEHTQITG SFKLRGAFYN 
MLTRDVPAAG VVAASGGNHG AAVAYAATAL GHKSRIFVPA TIAKEEKLKR MRDFGAEVVL
TEGSVGACME DYAAYAETSG ALSVHPYDTI PTLTGQGTLA REIEQQMTEA DLGGIDTILV
STGGGGLIGG ISAWFRDRIK VVSIETEGTN TLERSLREGP DLDVPASGIA AGSLGGPRLG
IDSYALIKAF VDEAIILPDT EVFTAAKRLW DGTRLIGEPG SAVALAALTS GAYVPEKDER
VCVVLCGGNA EPDWFAT