Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2602 |
Symbol | |
ID | 3935065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2617391 |
End bp | 2618581 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904966 |
Product | serine-glyoxylate aminotransferase |
Protein accession | YP_510544 |
Protein GI | 89055093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0190637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.923656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTC AGAACCCGGT CTTTATTCCC GGCCCTACGA ATATGCCCGA GAGGATTCGC ACGGCTTGTG ATATGCCCAC GATTGATCAC CGCTCTCCAA CCTTTGGACG CATTCTGCAT CCCTGTCTTG AGAACGTGCG CAAGATCCTG AAATCAGACA ACGCCCACAT CTTCATCTTC CCCTCCACCG GCACTGGCGG TTGGGAAACG GCGCTGACCA ACACGCTGTC ACCCGGCGAC AAGGTTCTGG CAGCACGCAA TGGCATGTTC AGCCATCGCT GGATCGATAT GTGCCAACGC CACCAACTGG ATGTGGACAT TGTCGAGACG CCCTGGGGTG CGGGCCTGCC CGCCGAGCGT TACGCGGAAA TTCTCGCAGC GGATACGGCC CACGAGATCA AGGTCGTGCT GGCGACGCAT AATGAGACGG CCACGGGCGT CAAATCCGAC ATCGCTGCCG TCCGCCGCGC GCTGGACGAC GCGGGCCACC CCGCCCTGCT GTTCGTGGAT GGGGTCAGCT CTATCGCATC CATGGACTTT CGCTTTGACG AATGGGGCGT GGACATCGCC GTGACCGGAT CGCAAAAGGG GTTCATGCTG CCAGCCGGTC TGGCGATTGT CGGCTTCTCC GACAAGGCGA AGGCCGCAAG CGAAACCGCG ACACTCCCGC GCACCTTCTT CGATATCAAG GACATGGCGG GTGGCTATGC CGCCAACGCC TTCCCCTACA CGCCGCCCGT GGGTTTGATG CGGGGATTGA AACTGGCCAC GGATCTCCTG CTAGAGGAAG GGTTGGAGAA CGTCTTTGCC CGGCATCACC GCATTGCTGA AGGCGTTCGC CGCGCCGTGG ATGCCTGGGG ACTGGAGCTG TGCGCGCAGA GCGCCGATGT GCAGTCTGAC ACCGTCAGCG CGATCAAAAC GCCCGAGGGA TTCGACGCCA CCGATATCGT GACCCGCGCG GCAGAGACCT ATGGCGTCGC GTTCGGTGTC GGTCTGGGCG AGGTTGCAGG CAAGGTCTTT CGCATCGGCC ATCTGGGCAG CCTCACGGAC GTCATGGCGC TGTCAGGCCT CGCCACCGCC GAGATGTGCA TGGTGGATCT GGGTCTCGAC ATCAAACTGG GCTCTGGCGT GGCGGCGGCA CAGGAATACT ATCGCACAAA CCCTGCACAA TCGGCACTGC CGGTGGATTG A
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Protein sequence | MSFQNPVFIP GPTNMPERIR TACDMPTIDH RSPTFGRILH PCLENVRKIL KSDNAHIFIF PSTGTGGWET ALTNTLSPGD KVLAARNGMF SHRWIDMCQR HQLDVDIVET PWGAGLPAER YAEILAADTA HEIKVVLATH NETATGVKSD IAAVRRALDD AGHPALLFVD GVSSIASMDF RFDEWGVDIA VTGSQKGFML PAGLAIVGFS DKAKAASETA TLPRTFFDIK DMAGGYAANA FPYTPPVGLM RGLKLATDLL LEEGLENVFA RHHRIAEGVR RAVDAWGLEL CAQSADVQSD TVSAIKTPEG FDATDIVTRA AETYGVAFGV GLGEVAGKVF RIGHLGSLTD VMALSGLATA EMCMVDLGLD IKLGSGVAAA QEYYRTNPAQ SALPVD
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