| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2587 |
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| Symbol | |
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| ID | 3935050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2596487 |
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| End bp | 2597431 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904951 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510529 |
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| Protein GI | 89055078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000137508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA CCTCTGCCCC CGACACATCT GACGCAGTGC ACCGCCCCGC CGCCGCCCCG
GCAGACGGTC TGAGCATCAT GCAAAAGCGG ACGCTTTGGG CCTGGGCGTT TCTTGCGGTC
CCGGTCCTCT TCTACGTCGT CATTCGCTTC TACCCGACCG GCAACGCCAT GGTTCTGTCG
TTTCAGGAAT GGAACCTTCT GGGGGACCGC ACCTGGGCGG GCCTCGACAA TTACCGGGTG
CTGTTTTCCG ATCCTGTTTT CTGGCAGGTC TTCCGCAACA CCTTTGTTTA CTTGCTTCTG
GGCACGCCCG TCAGCCTCGT GATCGCCTTC GTGATCGCCT ATCATCTCGA TCAGGTCCGG
TTCATGCACG GCACGATCCG GGCGCTCTAT TTCGTGCCCT TCATGACGTC GGCTGTGGCG
ATGGCCTGGG TCTGGCGCTG GTTCTATCAG GACGTGCCGA TTGGCCTGTT CAACAACTGG
CTGGCGACGT TCGGCATCCC GCAGATCGAC TTCCTGGACA GCACGACCAA TGCGCTGCCC
TCCATCCTCG CGCCTGCGAT CTGGGCTGGT TTGGGCTTTC AGATCATCAT CTTCATGGCG
GGTTTGCGGG CCATCCCACG CACCTTCTAT GAGGCTGCAG AGATCGACGG CGTCTCCACC
TGGACGGTGC TGTGGGAAAT CACCCTGCCG CTTCTGCGGC CCACCATCGT GTTCGTCGTG
GTCCTGTCGT CCATCGGCTT CCTGCGCATT TTCGACCATG TGTTCAACAT GACGTCGGCC
AACCCGGGCG GGCCGCTGAA CTCCACCAAA CCGCTGGTGT TGATGATCTA CCAGACCGCA
TTCGACAGCT TCGACATGGG CTATGCCGCG GCCCAAACGG TTGTGTTGTT CGTGATCCTG
CTGATCGTGA GCCTGATCCA ACTGCGCCTT CTGAGGGACC GTTGA
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| Protein sequence | MASTSAPDTS DAVHRPAAAP ADGLSIMQKR TLWAWAFLAV PVLFYVVIRF YPTGNAMVLS
FQEWNLLGDR TWAGLDNYRV LFSDPVFWQV FRNTFVYLLL GTPVSLVIAF VIAYHLDQVR
FMHGTIRALY FVPFMTSAVA MAWVWRWFYQ DVPIGLFNNW LATFGIPQID FLDSTTNALP
SILAPAIWAG LGFQIIIFMA GLRAIPRTFY EAAEIDGVST WTVLWEITLP LLRPTIVFVV
VLSSIGFLRI FDHVFNMTSA NPGGPLNSTK PLVLMIYQTA FDSFDMGYAA AQTVVLFVIL
LIVSLIQLRL LRDR
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