| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2534 |
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| Symbol | |
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| ID | 3934997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2534018 |
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| End bp | 2536582 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904898 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_510476 |
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| Protein GI | 89055025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.175244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA TTGTTGGGTT TTTCGGCGCG ATTTTCAGCG CAGTCACGTT GGGGCTGGTG
TTCGCGGCTC TGGGGGTCGG TGGCCTGTTG TTCACCTACT CGCGTGGCCT GCCGGACCAT
GAGGCGCTGT CGCAATACGC GCCGCCGACC ATCAGCCGCA TCTATTCGCG CCAAGGCATG
ATCGTGGACG AATTCGCGAC CGAACGGCGG CTGTTCACGC CCGCCGAGGA GATCCCGGAT
CTGGTCTCGT TCGCCTTCGT CTCCGCCGAG GATCGCAACT TCTACACCCA CTCCGGCTAT
GATCCGCGCG CGATTGTCGC GGCCTTCGTT GATGCCGTGC GCTCTCGCGG GCAGGACGTG
CGTGGCGCGT CGACGATCAC CCAGCAGGTG ATGAAGAATT TCCTTCTCGA CAGCTCCCGC
ACGGTTGAAC GGAAGGTGCG CGAGATCATT CTGGCGGCCC GGATCGAACG GACGCTGAGC
AAGGACCGCA TTCTGGAATT GTACCTGAAT GAGATCTTTC TGGGCCAGAA TTCCTATGGC
GTCACCGCCG CCGCCCAGAC CTATTTCAAT GCGACGCTGG AGGATCTGAC GTTGGAGCAG
GTGGCCTATC TGGCCGCGTT GCCGCAGGCC CCCTCGCGGT TCCACCCGGT CAATGATTAC
GAGCGTGCTG TGGGCCGCCG CGATTACGTT CTGCGCGAGA TGTACGAGAA CGGCTATGTG
ACGCTGGAAG AGATGGAGGC CGCGCAGGCC ATGCCGCTGG AGACAGTGCA GGGTGGCCAT
ATCGAAGGCC GCCGTCTGAC CCGTCCGCCG CGCAACTACT TCACGGACGA GATTCGCCGT
CAGCTTTCGG CGCAATACGG GGCGGATGAG TTCTTCTCCG GTGGCTATGC CGTGCGCTCC
ACCATGGATG AGAGCCTGCA GGAGGTGGCG GAAGCCTCGC TGCGCCGTGC GTTGGAGCGC
TATGACCGGA ATCTGGGCAC CTGGCGCGGG GCCGCTGACA CGATTGAGCC CGGTCTGTTA
ACCGAAGAGG CCAGCTGGCG CGACGCCCTG CGCGGGGCAG AGATCGCGCG CGACGTGGAC
GGCTGGTTTG CCGCTGTCGT GCTGGAGGTG GGCGATAGTT CGGCCCGGAT CGGCATTGAA
GGTGTCGAGG ACGACGATGA CGGCCATTTC ATCCCCGCCG AAGACGTGAC ATGGGCGCGT
CCGCTGCTTG AAGACGGCTC GCGCGGGAGT ACAGCGCGCG TGGCCGGCGA TTTGCTGAGC
GTTGGCGACG TGGTCCACGT GCGCCGCATG ACCAATGACA GCGATGGCAG CTTCATCCGC
TGGACCCTGC GCCAGATCCC CGAGGTGCAG GGCGGCTTCA TGGCCATGGA TGTGCATACG
GGCCGCGTTC TGGCGATGCA GGGCGGGTTT TCGTACCAGT ATTCCAGCTT CAACCGGGCG
ACCCAGGCCA CGCGCCAGCC GGGCTCCAGC TTCAAGCCGT TCGTCTATGC GGCCGCTCTG
GATTCCGGCT ATGGCCCCAA CACCATCGTG ATTGATGCGC CGATTGAGGT CGCGACAGGT
GACGGCATCT GGCGGCCGAC GAATGCGTCG AACCAGTTCT ACGGCCCGTC GCCCCTGCGC
ACGGGGATTG AGCGATCCCG CAATCTGATG ACCGTGCGTC TGGCCCAGGA TGTGGGCATG
GAGACCGTCG CCCGGTATGC CGAGCGGTTC GGCGTCTACG ACGATATGCA GCCGTTTCTT
GCGAACGCGC TTGGCAGTCA GGAGACGACG CTGTTTCGCA TGGTGGCGGC CTACGCGATG
TTTGCCAATG GCGGTGAGCG GGTGGAGCCG ACGCTGGTGG ACCGGATCCA GAACCGCTAT
GGCGAAACGG TGTATCGCCA TGACCAGCGC CTCTGCCCGG ATTGTGGCGA GGCAGAGATC
GAGGCGGGCC TCGCGCCCCG GATCGTCTCG ACCCGGGAGC GGGTGATCGA CCCGATCACC
GCCTATCAAC TGACGTCGAT GATGCGCGGC GTGGTCCAGC GCGGCACCGC TTCGGGCTCG
GTCAATCTCC CGGTGCCCAC GGCGGGCAAG ACGGGCACGA CAAACGACGC GCGGGACGTT
TGGTTTGTGG GCTTCACGTC CAACATCGTG GCGGGCTGCT ACATCGGCTA TGATCAGCCG
GAAAGCCTGG GCCGGGGCGC GTCTGGCGGC GGCATGTGCG GCCCGGTATT CCAACGCTTC
ATGCTGGAGG CGATCGAGGA ATACGGATCG GGTGATTTTC CGGTGCCCGA GGGCGGCGCG
TTTTACCCCA TCGACCGCTA TTCCGGCGCG CGCCTGCCAA GTGGCGCGTC TGGCGAGAAT
GTGGTCTACG AATTGTTCCG GGCTGGCGAA GCGCCGTTCG AGGGGCTTTT GTCGGTCATC
GATGGCGGGT GGGCGATGTC ATCCGACATC CCGATGTTCA GCCAGGAGGG CGGAGATGGC
GGCGGTGGCG GTCAGGGCAC TGTGGTGGAA ACGTCAGACG GCGACGCCGC GCGGGTGCCG
ACAAACACCG GCTTTGGCAC GCTCAGTTCA GGCGGATTGT ACTGA
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| Protein sequence | MRFIVGFFGA IFSAVTLGLV FAALGVGGLL FTYSRGLPDH EALSQYAPPT ISRIYSRQGM
IVDEFATERR LFTPAEEIPD LVSFAFVSAE DRNFYTHSGY DPRAIVAAFV DAVRSRGQDV
RGASTITQQV MKNFLLDSSR TVERKVREII LAARIERTLS KDRILELYLN EIFLGQNSYG
VTAAAQTYFN ATLEDLTLEQ VAYLAALPQA PSRFHPVNDY ERAVGRRDYV LREMYENGYV
TLEEMEAAQA MPLETVQGGH IEGRRLTRPP RNYFTDEIRR QLSAQYGADE FFSGGYAVRS
TMDESLQEVA EASLRRALER YDRNLGTWRG AADTIEPGLL TEEASWRDAL RGAEIARDVD
GWFAAVVLEV GDSSARIGIE GVEDDDDGHF IPAEDVTWAR PLLEDGSRGS TARVAGDLLS
VGDVVHVRRM TNDSDGSFIR WTLRQIPEVQ GGFMAMDVHT GRVLAMQGGF SYQYSSFNRA
TQATRQPGSS FKPFVYAAAL DSGYGPNTIV IDAPIEVATG DGIWRPTNAS NQFYGPSPLR
TGIERSRNLM TVRLAQDVGM ETVARYAERF GVYDDMQPFL ANALGSQETT LFRMVAAYAM
FANGGERVEP TLVDRIQNRY GETVYRHDQR LCPDCGEAEI EAGLAPRIVS TRERVIDPIT
AYQLTSMMRG VVQRGTASGS VNLPVPTAGK TGTTNDARDV WFVGFTSNIV AGCYIGYDQP
ESLGRGASGG GMCGPVFQRF MLEAIEEYGS GDFPVPEGGA FYPIDRYSGA RLPSGASGEN
VVYELFRAGE APFEGLLSVI DGGWAMSSDI PMFSQEGGDG GGGGQGTVVE TSDGDAARVP
TNTGFGTLSS GGLY
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