Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2484 |
Symbol | |
ID | 3934942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2480121 |
End bp | 2481035 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637904843 |
Product | phage integrase |
Protein accession | YP_510426 |
Protein GI | 89054975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.72317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0269236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGC CAGCCCAGGA CATGGATTGG ATCGCCCTCT ATCTGGACGC CGCCGCTGCC GAGCAGGGGG CCGCGCGCAA CACGCTTCTG GCCTATGGGC GCGACCTGAA GGACGCCATG ATGTCGGTTC GTAAATCCGG CGGATTTGCC GGCGCCGACC GTGCCGCATT GGAGGCCTAT ATTGCCGGGC TTGAGGCCCA GGGGCTGGCC GCGGCCACCC GGGCGCGCCG GTTATCCTCG CTCAAACAAC TCTACCGCTT CGCCCATGAG GAGGGGTGGC GCGAGGACAA CCCGACCTTG CAAATCACCG GTCCCGCGCG CACCCGCAAG CTGCCCGGCA CCCTGTCGCT GGAGGAGGTC GACGCGCTGC TGGAGGCCTC CGCCACCTAT GGCCGCAATG ATGCCGACCG CTTGCGCAAT CATTGCCTGA TGCAGATCCT CTACGCCACG GGCCTGCGCG TGACAGAACT GGTGTCGCTG CCCATCACGG CGCTGCGGGG CGATCCGAAC ATGCTGCTGG TCCTGGGCAA GGGCGGGAAG GAGCGGATGG TCCCCCTGTC GCCGCCCGCG CGCACGGCCA TGGCCGCCTG GCTGGACCAT CTTGACGCAA CGCAGGAGGA GCCGCGCAGC CTGTTTGCGT TTCCCTCCCA CGGCAAATCC GGCCACCTCA CGCGGGTGCG GTTCTTCACC CTGATCAAGG AGTTAAGCGC CAGCGCGGGC ATCGACCCCG CCCGCGTCAC GCCCCACACC CTGCGCCATG CCTTCGCCAC GCATCTGTTG CAGAACGGGG CGGACCTGCG CGCGATCCAG ACGCTTCTGG GCCATGCCGA TATCGCCACG ACCGAGATCT ATACCCACAT CCTGGATGAA CGCCTGCGCC AGTTGGTCCT GGACCATCAT CCCCTGGCGC GGTGA
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Protein sequence | MRAPAQDMDW IALYLDAAAA EQGAARNTLL AYGRDLKDAM MSVRKSGGFA GADRAALEAY IAGLEAQGLA AATRARRLSS LKQLYRFAHE EGWREDNPTL QITGPARTRK LPGTLSLEEV DALLEASATY GRNDADRLRN HCLMQILYAT GLRVTELVSL PITALRGDPN MLLVLGKGGK ERMVPLSPPA RTAMAAWLDH LDATQEEPRS LFAFPSHGKS GHLTRVRFFT LIKELSASAG IDPARVTPHT LRHAFATHLL QNGADLRAIQ TLLGHADIAT TEIYTHILDE RLRQLVLDHH PLAR
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