Gene Jann_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2484 
Symbol 
ID3934942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2480121 
End bp2481035 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID637904843 
Productphage integrase 
Protein accessionYP_510426 
Protein GI89054975 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.72317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0269236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC CAGCCCAGGA CATGGATTGG ATCGCCCTCT ATCTGGACGC CGCCGCTGCC 
GAGCAGGGGG CCGCGCGCAA CACGCTTCTG GCCTATGGGC GCGACCTGAA GGACGCCATG
ATGTCGGTTC GTAAATCCGG CGGATTTGCC GGCGCCGACC GTGCCGCATT GGAGGCCTAT
ATTGCCGGGC TTGAGGCCCA GGGGCTGGCC GCGGCCACCC GGGCGCGCCG GTTATCCTCG
CTCAAACAAC TCTACCGCTT CGCCCATGAG GAGGGGTGGC GCGAGGACAA CCCGACCTTG
CAAATCACCG GTCCCGCGCG CACCCGCAAG CTGCCCGGCA CCCTGTCGCT GGAGGAGGTC
GACGCGCTGC TGGAGGCCTC CGCCACCTAT GGCCGCAATG ATGCCGACCG CTTGCGCAAT
CATTGCCTGA TGCAGATCCT CTACGCCACG GGCCTGCGCG TGACAGAACT GGTGTCGCTG
CCCATCACGG CGCTGCGGGG CGATCCGAAC ATGCTGCTGG TCCTGGGCAA GGGCGGGAAG
GAGCGGATGG TCCCCCTGTC GCCGCCCGCG CGCACGGCCA TGGCCGCCTG GCTGGACCAT
CTTGACGCAA CGCAGGAGGA GCCGCGCAGC CTGTTTGCGT TTCCCTCCCA CGGCAAATCC
GGCCACCTCA CGCGGGTGCG GTTCTTCACC CTGATCAAGG AGTTAAGCGC CAGCGCGGGC
ATCGACCCCG CCCGCGTCAC GCCCCACACC CTGCGCCATG CCTTCGCCAC GCATCTGTTG
CAGAACGGGG CGGACCTGCG CGCGATCCAG ACGCTTCTGG GCCATGCCGA TATCGCCACG
ACCGAGATCT ATACCCACAT CCTGGATGAA CGCCTGCGCC AGTTGGTCCT GGACCATCAT
CCCCTGGCGC GGTGA
 
Protein sequence
MRAPAQDMDW IALYLDAAAA EQGAARNTLL AYGRDLKDAM MSVRKSGGFA GADRAALEAY 
IAGLEAQGLA AATRARRLSS LKQLYRFAHE EGWREDNPTL QITGPARTRK LPGTLSLEEV
DALLEASATY GRNDADRLRN HCLMQILYAT GLRVTELVSL PITALRGDPN MLLVLGKGGK
ERMVPLSPPA RTAMAAWLDH LDATQEEPRS LFAFPSHGKS GHLTRVRFFT LIKELSASAG
IDPARVTPHT LRHAFATHLL QNGADLRAIQ TLLGHADIAT TEIYTHILDE RLRQLVLDHH
PLAR