Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2474 |
Symbol | |
ID | 3934932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2471968 |
End bp | 2472513 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904833 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_510416 |
Protein GI | 89054965 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.251539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0229175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAGA GTGTTGGAGA GAGTTTAGTG GGACGCGCAG ATTCGGGTGC CATTTGTCCG ACAGTGGCCG GCGTGGTGAA GTGGTTTGAC ACCACAAAAG GGTTCGGATT TGTCCTGTCC GACGAAGGTG GTCCCGACAT TCTTCTGCAC GCCAATGTTC TGCGCAGCTT CGGACGGGGA TCCATCGCCG AAGGCGCGCG CGTCATGCTC CGCACGCAGG CCACCGGACG AGGTCTTCAA GCCGTAGAGA TCATCGCGAT TGAGGCCGTT GTGGGCGAGC CCACAGACCC GGATCGTCCC ATCCCCGATA TGCCTGATGC GACCGATGTT CCCCTTGTGG CAGCGCGCGT GAAGTGGTTT GACAAGGCCA AGGGCTTCGG CTTTGCCAAT GTGTTCGGCC ATTCCGAGGA CGTGTTCGTG CATGTCGAAG TTCTGCGCCG CTCCGGCTTT ACCGAGCTTC AGCCCGGTGA GGCGGTGGCC ATGAAGGTGG TTGATGGTCC GCGGGGCCGG ATGGCCGCTG AAGTGCGGAC CTGGGACGCG ATATAG
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Protein sequence | MVKSVGESLV GRADSGAICP TVAGVVKWFD TTKGFGFVLS DEGGPDILLH ANVLRSFGRG SIAEGARVML RTQATGRGLQ AVEIIAIEAV VGEPTDPDRP IPDMPDATDV PLVAARVKWF DKAKGFGFAN VFGHSEDVFV HVEVLRRSGF TELQPGEAVA MKVVDGPRGR MAAEVRTWDA I
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