| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2472 |
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| Symbol | |
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| ID | 3934929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2466982 |
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| End bp | 2470692 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904830 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_510414 |
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| Protein GI | 89054963 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0474976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG AACGGCGATT TACCCGTGAC GGCGCAGATG TGTACGCGGA TCAGACCTTT
ACCACGACCA CGTCGGAGAT CCGCAATCCC GACGGCACGA TCGTGTTCAA GCTCGACAAT
GTCGAAGTGC CGACCGGCTG GAGCCAGGTT GCCTCTGACG TGATCGCCCA GAAATACTTC
CGCAAGGCTG GTGTGCCCGC GGCCACCAAG CCCGTGAAGG AAAAAGGCGT TCCCGCATTC
CTTCAGCGCC ACGTGGCCGA CGATAAGGCG CTGGAGGCTA TGCCGGAGGA CCAGCGTTAT
GGTGGCGAAA CGTCCGCCAA GCAGGTCTTC CGGCGCCTTG CCGGAGCGTG GGCCTATTGG
GGCTGGAAGG GCGGATACTT CACGTCCGAG TCTGACGCGC AGGCCTATTT CGATGAGATG
CAGCTGATGC TGGCGCGCCA GATGGCCGCG CCCAATTCCC CGCAATGGTT CAACACCGGC
CTGCACTGGG CATACGGCAT CGACGGCCCG GCGCAGGGGC ACCATTATGT CGACTACAAG
AGTGGCAAGC TGACGAAATC CACGTCGTCT TATGAGCATC CTCAGCCCCA CGCCTGCTTC
ATTCAGGGCG TGAAGGATGA TCTGGTGAAC GACGGCGGCA TCATGGACCT GTGGGTGCGG
GAGGCGCGTC TGTTCAAATA TGGCTCCGGC ACCGGCACCA ACTTCAGCCA CCTGCGCGGC
GAGGGCGAGA AGCTATCAGG CGGTGGCAAA TCCTCCGGCC TGATGGGCTT CCTGAAGATC
GGTGACCGCG CGGCGGGCGC GATCAAGTCC GGCGGCACCA CGCGGCGCGC GGCCAAGATG
GTCATCGTCG ACGCAGACCA CCCCGATATC GAAGACTTCA TCGAATGGAA GGTGCTGGAA
GAGCAGAAAG TGGCGAGCAT CGTCGCGGGC TCCAAGATGC ATGAAAAGAT GCTGAACGGC
ATTTTCGGCG CGATCAAAGA CTATAAAGCA GAGGGTGTTG CACTTCATGC AACTGGGGAC
GGATCGCTGG AGGATGCAGT CGATCCGGCC AAGAACCAGA GCCTGAAGCA GGCGATCCGG
GAGGCCAAAA AGGTCGCGAT CCCCGAGACT TACGTCAAGC GCGTGCTGGA CTATGCCAAG
CAGGGCCACA CGTCGATTGA ATTCCCCACC TACGACACGG ATTGGGACTC TGAGGCCTAT
AACTCCGTCT CGGGCCAGAA CTCCAACAAC TCCATCCGCG TGACCGACGC CTTCCTCAAG
GCCGTCGAAA ATGATGACGA TTGGCAGCTG ATCAACCGCC GCGACGGCAA AGTCTCCAAG
ACGATCAAGG CCCGCGATCT GTGGGAAAAG GTCGGCCATG CGGCGTGGGC CTGCGCGGAC
CCGGGCATTC AGTACCACGA CACGGTCAAT GCCTGGCACA CATGCCCCGA AGACGGGGCG
ATCCGGGGCT CCAACCCGTG CTCCGAATAC ATGTTCCTGG ACGACACGGC GTGCAACCTT
GCGTCGATGA ACCTGCTGAC GTTCTACGCG GGCGGCACGT TCGACGCGGA ATCCTACATG
CACGCCTGCC GGTTGTGGAC GCTGACGCTG GAAATCTCCG TCATGATGGC GCAGTTCCCG
TCCAAGGAAA TCGCGCAGCG CTCCTATGAT TTCCGCACGC TGGGTCTGGG GTTTGCCAAT
ATCGGCGGGT TGCTGATGAA CACGGGGCAT TCCTATGACA GCGCGGAAGG CCGTGCCCTC
TGCGGCTCCC TCACTGCGAT CATGACCGGG GTGGCTTATG CAACCTCTGC CGAGATCGCG
TCGGAACTGG GGCCCTTCGC GGGCTTCGCC AAGAACCGCG AGCATATGCT GCGGGTGATG
CGCAACCACC GCGCCGCCGC CTATGGCAAG ACCGACGGCT ACGAGGAGGT CAACGTCAAC
CCCGTCGCCC TCGACCACAT CAACTGCCCC GACCAGACAC TGGTTGAACT GGCCAAGCAG
GCCTGGGACG AGGCGCTGAC CCTGGGCGAG GCCCACGGCT ACCGCAACGC GCAGGCCACC
GTCATCGCAC CCACCGGCAC CATTGGCCTG GTCATGGATT GCGACACCAC GGGCATCGAG
CCCGACTTCG CCCTGGTGAA GTTCAAGAAG CTCGCCGGTG GCGGATATTT CAAGATCATC
AACCAGTCCG TTCCGGCGGC GCTGGAAGGT CTGGGCTATG CCTCCAGCCA GATCGAGGAA
ATCATCGCCT ATGCGGTCGG TCACGGCACC ATCGGGCAGG CGCCGGGCAT CAACCACACC
TCCCTGATCG GCCACGGCTT TGGCCCGGAA GAGATCCGCA AGATCGAAGA GGCGCTGCCG
CAGGCGTTCG ACATCCGCTT CGTGTTCAAC CAGTGGACCC TTGGCGCAGA GTTCTGCACC
GAGACCTTGG GCATCCCGGC CGACAAGCTG AATGATCCGA CGTTCGACCT GCTGCGCCAC
CTTGGCTTCA CCAAGGCCGA TATCGAGGCC GCGAATGATC ACGTCTGTGG GACAATGACG
CTGGAAGGCG CACCGTTCCT GAAGGACGAA CACCTGCCGG TCTTCGATTG CGCCAACCCC
TGCGGCAAGA AGGGCAAGCG GTATCTGTCC GTGGAGGCGC ACATTCACAT GATGGCCGCC
TCGCAATCCT TCATCTCGGG CGCGATTTCC AAGACGATCA ACATGGCCAA CCACGCCACG
ATCGAGGATT GCCAGAAGGC GTATGAGCTG TCCTGGTCCC TTGGGGTGAA GGCCAACGCG
CTCTACCGTG ATGGGTCCAA GCTGTCGCAA CCCCTCGCCG CCGCTCTGGT CGAGGATGAT
GACGACGCCG CAGAGATCCT GGAAACCGGG ACCGCCCACG AGAAAGCGCA AGTGCTGGCC
GAGAAGGTGG TCGAGAAGAT CATCGTCAAG GAAATCGCGC GGGGCCGCGA AAAGATGCCC
CAGCGCCGGA AGGGCTATAC CCAGAAGGCC ATCGTCGGCG GGCACAAGGT CTACCTGCGC
ACCGGCGAAT ATGAGGACGG CAACCTGGGT GAGATCTTCA TCGACATGCA CAAGGAAGGC
GCGGGCTTCC GGGCGATGAT GAACAACTTC GCCATCGCGG TCAGCGTGGG CCTGCAATAC
GGCGTGCCGC TGGAGGAGTT CGTGGACGCC TTCACCTTCA CCAAGTTCGA GCCCTCGGGC
ATGGTGCAGG GCAACGAGAC GATCAAGAAC GCCACTTCGA TCCTCGACTA CATCTTCCGG
GAACTGGCCG TCAGCTATCT GGATCGCACC GATCTGGCCC ATGTGGCCCC CACGGGCGAC
ACGTTCGATG ATGTGGGTCG CGGGGCCGAG GAGGGCGTGA GCAACTTCAC CGAAGTGCCC
GGCTCCCGCG CGACCTCTGC GGTGGATGTG CTGAAACAGG TCGCCTCCAC CGGCTACCTC
CGCAACCGCG CGCCCCAGGA ATTGCATGTA TTGCAGGGCG GCATGGCGGC CGATCCGGTC
GCGGTGCTGG AGACACTGGT GCCAGAAGTG AAGGGCAGCG GCGGCACTAT TGCGGCGGCG
ACCTCCACCA CGGTGGTCTC CACCGGAGCC GTCTCCCTCG ACGCGCGGAC AAAGGCGAAG
ATGCAGGGCT ACGAGGGCGA GGCTTGCGGC GAGTGCGGCA ACTACACGCT GGTGCGCAAC
GGGACCTGCA TGAAGTGCAA TACATGCGGC GGGACGTCCG GGTGTAGCTG A
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| Protein sequence | MKIERRFTRD GADVYADQTF TTTTSEIRNP DGTIVFKLDN VEVPTGWSQV ASDVIAQKYF
RKAGVPAATK PVKEKGVPAF LQRHVADDKA LEAMPEDQRY GGETSAKQVF RRLAGAWAYW
GWKGGYFTSE SDAQAYFDEM QLMLARQMAA PNSPQWFNTG LHWAYGIDGP AQGHHYVDYK
SGKLTKSTSS YEHPQPHACF IQGVKDDLVN DGGIMDLWVR EARLFKYGSG TGTNFSHLRG
EGEKLSGGGK SSGLMGFLKI GDRAAGAIKS GGTTRRAAKM VIVDADHPDI EDFIEWKVLE
EQKVASIVAG SKMHEKMLNG IFGAIKDYKA EGVALHATGD GSLEDAVDPA KNQSLKQAIR
EAKKVAIPET YVKRVLDYAK QGHTSIEFPT YDTDWDSEAY NSVSGQNSNN SIRVTDAFLK
AVENDDDWQL INRRDGKVSK TIKARDLWEK VGHAAWACAD PGIQYHDTVN AWHTCPEDGA
IRGSNPCSEY MFLDDTACNL ASMNLLTFYA GGTFDAESYM HACRLWTLTL EISVMMAQFP
SKEIAQRSYD FRTLGLGFAN IGGLLMNTGH SYDSAEGRAL CGSLTAIMTG VAYATSAEIA
SELGPFAGFA KNREHMLRVM RNHRAAAYGK TDGYEEVNVN PVALDHINCP DQTLVELAKQ
AWDEALTLGE AHGYRNAQAT VIAPTGTIGL VMDCDTTGIE PDFALVKFKK LAGGGYFKII
NQSVPAALEG LGYASSQIEE IIAYAVGHGT IGQAPGINHT SLIGHGFGPE EIRKIEEALP
QAFDIRFVFN QWTLGAEFCT ETLGIPADKL NDPTFDLLRH LGFTKADIEA ANDHVCGTMT
LEGAPFLKDE HLPVFDCANP CGKKGKRYLS VEAHIHMMAA SQSFISGAIS KTINMANHAT
IEDCQKAYEL SWSLGVKANA LYRDGSKLSQ PLAAALVEDD DDAAEILETG TAHEKAQVLA
EKVVEKIIVK EIARGREKMP QRRKGYTQKA IVGGHKVYLR TGEYEDGNLG EIFIDMHKEG
AGFRAMMNNF AIAVSVGLQY GVPLEEFVDA FTFTKFEPSG MVQGNETIKN ATSILDYIFR
ELAVSYLDRT DLAHVAPTGD TFDDVGRGAE EGVSNFTEVP GSRATSAVDV LKQVASTGYL
RNRAPQELHV LQGGMAADPV AVLETLVPEV KGSGGTIAAA TSTTVVSTGA VSLDARTKAK
MQGYEGEACG ECGNYTLVRN GTCMKCNTCG GTSGCS
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