Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2454 |
Symbol | |
ID | 3934911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2447635 |
End bp | 2448966 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904812 |
Product | peptidase RseP |
Protein accession | YP_510396 |
Protein GI | 89054945 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000129388 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAATTCC TCCCCGCCTT CGGCAATATC GGCTTCACGC TTGTGGCTTT TGTCGCCGCC CTTTCGATCA TCGTGGCGAT CCACGAATAC GGCCATTACA TCGTGGGCCG TTGGTCGGGC ATCCATGCGG AGGTGTTTTC CATCGGCTTC GGCCCGGTCC TGTGGTCGGC CACTGACAAG CACGGCACGA AATGGCAGGT CGCGGCGCTG CCGTTCGGCG GATATGTGCG ATTTCTGGGC GATGCCAATG CGGCCTCCGC CGGGGCTGAC GGGGAGGCGA TGTCCGAGAT GGACGCGCGC GAACGCCGCC GCTCCATGCC CGGCGCGCCG CTTTGGGCGC GCGCCGCCAC GGTCGCAGCC GGTCCGATCT TCAACTTCAT CCTGTCGATC CTGATCTTTG CGGGCGTGGT TCTGGTCAGC GGGCGCGCCG CAGATGAGGC GCTGGTGGGC GGGCTGATCC CTGTCCCGGA AGAGATTCTG GTGCTGGAAG AGGGCGATCT GATCACCGGC ATCGAGGGCC AGGACGTTGA GGCCCTGGCC GATGTCTATG AGCTTGGCCG CTCCCTCGAC CCCCAACGCA ACCTGACCTA TGACATCATC CGCGACGGCG AGGCGATGCA GGTGGAGGCC GCGTTTCCGT TGCTGCCCAT CGTCGGCTCC GTCACCCCGC AATCGGCGGC GATCAACGCA GGCATTGCCG AGGGCGACGT GATCATGACC GTGGACGGCC AGCCGATCTA CGGGTTCAGC CAACTGCGCG CGGCGGTCGA TGCGTCCGAG GGCGCGGATC TGGATCTTGT GGTCTGGCGC GCCGGAGAGT TTCTGGACCT GACCCTTGCC CCGCGCTCCA CCGATCTGCC CACTGCGGAC GGCACGTTCG AGACGCGCTG GCTGATCGGC ATCACGGGCG GCTTGATTTT TGAGCCGCAA ACCGTCTCCG TCAATCCGTG GGAAGCGGTG ACCTTCGGCG CCAATCAGAC GCTGTTTATC ATCGAATCCT CGCTGTCGGG CCTGTCGCAT ATCATCACCG GGGCGATTTC CACCTGTAAC CTGCAGGGCC CCCTTGGCAT TGCGGAGACG TCGGGCGCGG CCGCATCACA GGGACTGGAC AACTTCATCT GGTTTATCGC GGTGCTCTCG ACCGCCGTGG GGCTGCTGAA CCTGTTCCCG ATCCCGGTTC TGGACGGCGG GCACCTTGTC TTTCATGCCT ATGAGGCTGT CACCGGCAAG CCACCCTCGG ACAAGGTGCT GCGCATCTTC ATGACGGTGG GTCTGACGCT TCTGCTGTCA CTGATGCTGT TTGCGCTGAC AAATGATATC TTCTGCCCGT AA
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Protein sequence | MEFLPAFGNI GFTLVAFVAA LSIIVAIHEY GHYIVGRWSG IHAEVFSIGF GPVLWSATDK HGTKWQVAAL PFGGYVRFLG DANAASAGAD GEAMSEMDAR ERRRSMPGAP LWARAATVAA GPIFNFILSI LIFAGVVLVS GRAADEALVG GLIPVPEEIL VLEEGDLITG IEGQDVEALA DVYELGRSLD PQRNLTYDII RDGEAMQVEA AFPLLPIVGS VTPQSAAINA GIAEGDVIMT VDGQPIYGFS QLRAAVDASE GADLDLVVWR AGEFLDLTLA PRSTDLPTAD GTFETRWLIG ITGGLIFEPQ TVSVNPWEAV TFGANQTLFI IESSLSGLSH IITGAISTCN LQGPLGIAET SGAAASQGLD NFIWFIAVLS TAVGLLNLFP IPVLDGGHLV FHAYEAVTGK PPSDKVLRIF MTVGLTLLLS LMLFALTNDI FCP
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