| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2408 |
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| Symbol | |
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| ID | 3934865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2409682 |
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| End bp | 2410566 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904766 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510350 |
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| Protein GI | 89054899 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0423159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.525947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCACC CAGCCCCCGA GATCGCAGCT TTCGTGCGCG TTGTGGAGCT TGGATCCTTT
GCATCGGTGG CGTCCGATAC CGGGTACACA TCCTCCGGCG TCTCCCGCAT GGTCACACGG
TTGGAGGAAA ATTTTGGCAC CAAGTTGTTT TTCAGATCAA CGCGGCAGCT GTCCCTGACC
CCTGACGGAG AGGCGTTCCT GCCACGGGCA CGGTCCATTC TGGACGCGAT CGAGGCGGCC
GGTGCCGACT TATCGGATGC AGCAGAGACC CCGCGCGGAC ATATCCGTCT GAACTGCGGC
ACGGCCTTCG CCAATCACAA GCTGGCGCCA CGTCTCGCGG ACTTCGCAAC GCGTTATCCG
CATATCTCGC TTAGCATTTC GGTCACCGAC CAACGGGTCG ATCCGGTCGC GCGGCAAGCG
GACGTGACGA TCCGGGTTGG CGATCTGGCA GATAGCACCC TCATCGCCAT CCCCTTGGGT
TCGGTCGCGC GCGTCATCGC CGCGAGCCCC GCTTATCTGG CGAAGCATGG AGAGCCCCAG
ATAGCACGGC ACCTTCTGAA ACATAATTGC CTGTTGTTGA ACGGGTTTCC ACATCAGGCC
GCCTGGCCCT TTCTGGAAAA GGGTCAGCCG ATCACGGTAT CTGTCAAAGG GACCCTGACA
TCCGACAGCG CCGAGACGCT TCTGCACGCC GCTATATCCG GCGCGGGCAT CATTCGACTG
GGCGATTTTC TGGGGGCCGA TGCGCTGGCG TCGGGTCAGC TGGTTCCGAT CCTGACCAGG
ACACATGATC CTGTCCGGCA ACCCATAACG GCGCTGGTGC CGCCCGGTCG ACACTCCGTT
CCGAGGGTGC GGGCGCTTTT GAACTTCCTC AAAGCGAACG TCTGA
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| Protein sequence | MPHPAPEIAA FVRVVELGSF ASVASDTGYT SSGVSRMVTR LEENFGTKLF FRSTRQLSLT
PDGEAFLPRA RSILDAIEAA GADLSDAAET PRGHIRLNCG TAFANHKLAP RLADFATRYP
HISLSISVTD QRVDPVARQA DVTIRVGDLA DSTLIAIPLG SVARVIAASP AYLAKHGEPQ
IARHLLKHNC LLLNGFPHQA AWPFLEKGQP ITVSVKGTLT SDSAETLLHA AISGAGIIRL
GDFLGADALA SGQLVPILTR THDPVRQPIT ALVPPGRHSV PRVRALLNFL KANV
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