| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2331 |
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| Symbol | |
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| ID | 3934787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2339047 |
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| End bp | 2340015 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904689 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_510273 |
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| Protein GI | 89054822 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0699297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC AATTGGTTGG CGCGCTTGTC GCGGCCACAA CACTCTTTGG CGCGGGCACG
GCCAGCGCTC AGGACACCTT TATCGCCATC GGCACGGGCG GCGTGACGGG CGTTTATTAC
CCGACTGGCG GCGCGATCTG CCGCCTTGTG AACCGCGACC GCGCGGACCA CGGCATTCGT
TGCGGCGTGG AATCCACCGG CGGCTCGGTC TTCAACATCA ACGCCATTCG CGGCGGTGAG
CTTGAGTTCG GCGTGGCCCA GTCCGACTGG CAGTACCACG CGTTCAACGG CACGTCCCGC
TTTGAGGAGC AGGGCGCGAT GGAAGAACTC CGCGCTGTCT TCTCGGTCCA CCCCGAGCCA
TTCACGGTTG TGGCGCGTGC CGATGCGGGC ATCACCAACT TTGCGGACCT GCAGGGCATG
CGCGTAAATG TCGGCAACCC CGGATCGGGC CAGCGCGGCA CGATGGAAGT GCTGATGGGT
GCCCTTGGCT GGACGATGGA CGACTTCGCC GTCGCGTCCG AGTTGCAGGC GGCCGAGCAG
TCCCAGGCGC TGTGCGACAA CAACATCGAC GCGATGATCT ACACCGTGGG TCACCCCTCG
GGCTCCATCC AGGAGGCCAC CACAGCCTGT GACAGCATCT TGGTCAACGT GACCGGCGAC
GCCGTGGATG GCCTGGTGGA GGAAAACTCC TTCTACCGCA CCGCCACGAT CCCCGGCGGC
ATGTATCGCG GGTCTGACGA CGACGTGACG ACCTTCGGCG TCGGCGCGAC CTTCGTGACC
TCGGCGGATG TGCCCGAAGA GGTGGTCTAC ACCGTGGTGG CGGCTGTGTT CGAGAATATC
GACACCTTCC GTGGCCTGCA CCCCGCGTTT GCCAACCTCG ACCCGGCGCA GATGGCCAAT
GACGGCCTGT CCGCGCCCCT GCACCCCGGT GCAGAGCGGT ATTTCCGCGA GGCTGGCCTG
ATCGAGTGA
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| Protein sequence | MNKQLVGALV AATTLFGAGT ASAQDTFIAI GTGGVTGVYY PTGGAICRLV NRDRADHGIR
CGVESTGGSV FNINAIRGGE LEFGVAQSDW QYHAFNGTSR FEEQGAMEEL RAVFSVHPEP
FTVVARADAG ITNFADLQGM RVNVGNPGSG QRGTMEVLMG ALGWTMDDFA VASELQAAEQ
SQALCDNNID AMIYTVGHPS GSIQEATTAC DSILVNVTGD AVDGLVEENS FYRTATIPGG
MYRGSDDDVT TFGVGATFVT SADVPEEVVY TVVAAVFENI DTFRGLHPAF ANLDPAQMAN
DGLSAPLHPG AERYFREAGL IE
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