Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2246 |
Symbol | |
ID | 3934700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2254129 |
End bp | 2255370 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904603 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_510188 |
Protein GI | 89054737 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.101865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCC TCGATGTCAT CGGCCCACAT ATGGGGCAAC CGGCCGACGT GCCAGATGTG ATCACCGATA CCATTCGGAC CATGCGCACC CATCTGGGGA TGGAAATCGG GTATCTGTCT GAATTTGTTG GCGATGATCT GGTGTTTCGG GCCGTTGATG CGCCGGGCCT TGAAGATCTG GCAAAGATCG GCGATGCGCG GTCCAGGTCA GAGACCTACT GCAATCACAT CCTGTCCGGG GCACTGCCCC AATTGATGGC CGACACTTTG GACTACCCCA TCGCCGCCGC GCTGCCGATC ACCCAGGCCA TCCCGATCCG CGCCCATGTC AGCGTCCCGA TTGAACGCTC GGACGGGTCG ATCTACGGCA TGTTCTGCTG CCTGTCGCCC CAACCCAACA AGACCCTCAA CGACCGCGAC CTGCAATTGA TGCGCAGCTT CGCGCGCCTG GCGCAGTCGG AGGTGCAGCG TGAGCTGGAG GGGAAATCCC GTCGGCAGGC CACGCTCGAT GTGATCCACA ATGTGGTGGA GCAACAAAAC TTCAAGATCG TCTATCAGCC GATTTTCTCG CTTGAGACGG GTGACGTGTC GGGGGTGGAG GCGCTCTGCC GGTTTGAGGC GGAACCGTAT CGCCCGCCAA ACCTCTGGTT CGACGATGCC GCAGGCGTTG GTCTGGGCGA AATGCTGGAG GTTTGCGTGA TCGAGGCCGC GATTGCCAAC CTGCACCTGC TGCCACCGGG GGCGTATCTG TCCCTCAATG CCAGTCCGCA AACGGTTGCG ACGGGTCTTC TGGCCCCGAT CCTGCAGGCC TTTCCGCCGG AGGTTTTGGT CGTGGAAGTG ACGGAGCATA TCGGCGTGTC CGACTGGGCA ACCCTGGACC GCGAATTGGA CAAGTTGCGC GATATGGGGA TCCGGATCGC CATCGACGAT GCGGGCGCAG GTTATGCGGG CCTGCAACAT ATGGTGCGGT TGCGGCCCGA TATCATCAAA CTGGATCGCT CACTGGTGGA CCGGGTCGAT GAAGATCCCG CGCGCCGGTC CTTATGCGCG GCGATGGTCC ATTACGCGAC CGAGACCGGG GCCGCCCTTG TCGCCGAAGG CATTGAACGC AAGGAAGAAG AGGACGTCCT TCGCAGCCTT GGCGTGCATC TGGGGCAGGG GTTCCTTCTG GCCAAGCCGA TGCCTCTGGA CGCATTTCTG GACGCGTATT GCCCGACCAA GTCGCAGGCG CATGTGAATT AA
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Protein sequence | MSRLDVIGPH MGQPADVPDV ITDTIRTMRT HLGMEIGYLS EFVGDDLVFR AVDAPGLEDL AKIGDARSRS ETYCNHILSG ALPQLMADTL DYPIAAALPI TQAIPIRAHV SVPIERSDGS IYGMFCCLSP QPNKTLNDRD LQLMRSFARL AQSEVQRELE GKSRRQATLD VIHNVVEQQN FKIVYQPIFS LETGDVSGVE ALCRFEAEPY RPPNLWFDDA AGVGLGEMLE VCVIEAAIAN LHLLPPGAYL SLNASPQTVA TGLLAPILQA FPPEVLVVEV TEHIGVSDWA TLDRELDKLR DMGIRIAIDD AGAGYAGLQH MVRLRPDIIK LDRSLVDRVD EDPARRSLCA AMVHYATETG AALVAEGIER KEEEDVLRSL GVHLGQGFLL AKPMPLDAFL DAYCPTKSQA HVN
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