Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2242 |
Symbol | trkA |
ID | 3934696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2249368 |
End bp | 2250744 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637904599 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_510184 |
Protein GI | 89054733 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0521644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCA TCATCTGCGG TGCGGGCCAG GTTGGCTGGC AGATCGCGCG GCATCTGTCT TCGGAAAACA ATGACGTCAC GGTCGTGGAC AACAATCCCG ATCTGGTGCG GCGCGCGACG GATATGCTGG ACGTGCAGGG CCTGACAGGC TTTGCCAGCC ACCCCGAAAT TCTGGACCGT GCGGGCGCGC GGGATGCGGA TATGGTGATC GCGGCGACGT TCTCGGACGA GGTCAACATG GTCACCTGCC AGGTCGCGCA TTCCGTCTTT GCCGTGCCGC GCAAGATCGC GCGCCTGCGG GCGCAGAGCT ATCTGGATAC AATCTATTCC GATCTCTATC GCCGCGACCA TCTACCGATC GATGTTGTGA TCTCGCCGGA GAAGGAGGTG GCGGAGGCGG TGCTGAATCG TATCGCGTCG CCCTCGACCT TCGATACGGA AAACTTTCTG GGCGGCGCGG TGCAGCTGAT GGGGATCGTG CTGGATGAGG ATTGCCCGGT CCTCGACACA CCGCTGCGGC AATTGTCGGA GCTATTCTCA ACCCTGCGCG CCATCGTGGT GGGCATCCGG CGGGACGGCA CGCTGTTTGC GCCTGAGCCC GGGGATCAGA TGTTTGCGGG CGATCAGATC TATGTCTTTA CCCATATCGA CGATGTGGCC CGGGCGCTGG AGATTTTCGG CAAAAGCCGC GCCCTGCCGG AACGGATCCT GATCATCGGC GGCGGCAATG TCGGGCTGAC CGTGGCCTCC AAGCTGGAGA AATCGGCCAC GCGGATGCGC ACCCGTGTTA TTGAGGCGAA CCGGACCCAG GCGGAGCGGG CGGCGGATGC GCTGGAGCGC ACCATCGTGC TGCATGGCGA CGGGTTGGAC GTGGACCTGC TGCGCGAGGC CAGCGTAGAG CGCGCCGATG TCGTGCTGTG CCTGACCGAT GACGACAAGA CCAATATGCT GGCCTCCGTG CGGGCAAAAT CGGCGGGCGC GGGCATGGCG ATCAGCCTGG TGAATGACCC GACACTGGTG CCGCTGATGG CGCCGTTGGG CATTGATGCC TATGTGAACC CGCGCTCTAC CACCGTGAGT TCCATCCTGC GCCACATTCG CCATGGCCGG GTGCGCGGCG TCTATTCCAT TGGCGATGCC GAGGCCGAGA TTATCGAGGC GCAGGTTCTG TCCACATCGC CCATCTCGGG CAAGGCCGTG CGCGATATCG ACTTCCCGGA AGGCGCGCTT TTGGGGGCGG TGCAGCGCGG CAAGGAAATT TTCCGACCAA CGGGCGCGGT TCGGATCGAG GAGGGCGACG TCGTGGTCAT CTTCGCGCTG GCCCCCGATG TGCCAGCGGT TGAGGCGCTT CTGCAAGTCT CCATCGACTT TTTCTGA
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Protein sequence | MKVIICGAGQ VGWQIARHLS SENNDVTVVD NNPDLVRRAT DMLDVQGLTG FASHPEILDR AGARDADMVI AATFSDEVNM VTCQVAHSVF AVPRKIARLR AQSYLDTIYS DLYRRDHLPI DVVISPEKEV AEAVLNRIAS PSTFDTENFL GGAVQLMGIV LDEDCPVLDT PLRQLSELFS TLRAIVVGIR RDGTLFAPEP GDQMFAGDQI YVFTHIDDVA RALEIFGKSR ALPERILIIG GGNVGLTVAS KLEKSATRMR TRVIEANRTQ AERAADALER TIVLHGDGLD VDLLREASVE RADVVLCLTD DDKTNMLASV RAKSAGAGMA ISLVNDPTLV PLMAPLGIDA YVNPRSTTVS SILRHIRHGR VRGVYSIGDA EAEIIEAQVL STSPISGKAV RDIDFPEGAL LGAVQRGKEI FRPTGAVRIE EGDVVVIFAL APDVPAVEAL LQVSIDFF
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