| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2240 |
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| Symbol | |
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| ID | 3934694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2246621 |
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| End bp | 2248018 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904597 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_510182 |
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| Protein GI | 89054731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.261318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA TTCTGGTCGT AGATGATGAA CGCGATATCC GGGAGTTGAT CTGTGATATC
CTGCAAGATG AAGGGTTTAC GACCCGGATG GCGGGCAATT CCGACGAGGC GATGGCGGAG
TTGAACAAAA GCGCGCCGGG CCTGATGATC CTCGATATCT GGCTCAAGGA CAGCAACATG
GACGGGATCG ACATCTTGGG CCATGTGAAG CGGGACAACC CCGAAGTGCC GGTCGTCATC
ATCTCGGGCC ACGGCAACGT CGAAATCGCG GTCGCGGCGA TCAAACAGGG CGCGTATGAC
TTCATCGAAA AGCCGTTTAA TATCGATCAG TTGATGGTCG TAATCAAACG CGCGATGGAG
ACGTCGCGTT TGCGCCGCGA GAACGTGTCG CTGCGGCGTC AGGACACGCG CACGGCGGAT
ATGATCGGCA GCTCGTCTGC CTTCCGGACG CTTAAAAGCC AGCTCGACAA GGTCACGAAA
TCCAATGGCC GCGTCATGCT GACAGGGGGG GCTGGCACCG GCAAGGAAGT GGCCGCGCGC
TACGTCCATG CGGAGAGCAA CCGCGCCGAT GCGCCGTTTG TGACCGTGGC CAGTGCCTCC
ATCCAGCCCG ATCATATGGA GGAGGTCCTG TTTGGTCGCG AAAGTCAGCA GCGCGGGGTA
GAGCAGGGGC TGTTGGAGCA AGCCCATGGC GGTGTGATCT ATTTCGACGA GGTCGCGGAT
ATGCCGCTGG CCACCCAAGC CAAGATCCTG CGCGTCCTGG TCGACCAGAG CTTCACGCGT
GTGGGGGGGA CCGGCAAGGT CCGGGTGGAT CTGCGTGTGA TTTCGTCGAC GACCCGGGAT
TTACAGGTCG AAATAACCGA AGGCCGCTTC CGGGAGGAGC TGTATCATCG CCTCAACGTT
GTGCCGGTTG AGGTTCCGTC GCTGGAAGAT CGCCGCGAGG ACGTGCCCGA GCTGGCGCGC
CATTTCATCG ACCTCTTCAA CCGCGAGCAA GGGCTTGCGA TCCGGGAGCT TGGCGACGAC
GCAGCGGCGA TGCTGCAGAC AATGTCCTGG CCGGGCAATG TGCGGCAGCT GAAGAACGTG
ATCGAGCGGG TGATGATCCT GGGCGACGGC TCTGGTCCCA TCGAGGCGCG CGATCTGCCG
GGGCAAGTGG AAGCGCCCAC GTCGGAGGAA GACATGGCGC TGTCGGCGTC CCTCACGACG
CTGCCGCTGC GCGAGGCGCG GGAGCTGTTT GAACGGCAGT ATCTGATGGC GCAGATCAAC
CGGTTTGGCG GCAATATTTC CCGCACGGCC AGCTTTGTGG GCATGGAACG ATCCGCCCTG
CACCGGAAGC TGAAATCCCT GGGGGTTGTG ACCACGTCCA AGGCCGGAAC GCGGGTGGCT
CAGGTCAGCG AAGGGTAG
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| Protein sequence | MSDILVVDDE RDIRELICDI LQDEGFTTRM AGNSDEAMAE LNKSAPGLMI LDIWLKDSNM
DGIDILGHVK RDNPEVPVVI ISGHGNVEIA VAAIKQGAYD FIEKPFNIDQ LMVVIKRAME
TSRLRRENVS LRRQDTRTAD MIGSSSAFRT LKSQLDKVTK SNGRVMLTGG AGTGKEVAAR
YVHAESNRAD APFVTVASAS IQPDHMEEVL FGRESQQRGV EQGLLEQAHG GVIYFDEVAD
MPLATQAKIL RVLVDQSFTR VGGTGKVRVD LRVISSTTRD LQVEITEGRF REELYHRLNV
VPVEVPSLED RREDVPELAR HFIDLFNREQ GLAIRELGDD AAAMLQTMSW PGNVRQLKNV
IERVMILGDG SGPIEARDLP GQVEAPTSEE DMALSASLTT LPLREARELF ERQYLMAQIN
RFGGNISRTA SFVGMERSAL HRKLKSLGVV TTSKAGTRVA QVSEG
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