| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2238 |
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| Symbol | |
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| ID | 3934692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2242879 |
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| End bp | 2244258 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904595 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_510180 |
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| Protein GI | 89054729 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.510977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAA CCGTACTTGT CGCCGATGAT GACCGCACGA TCCGCACCGT GTTGACCCAG
GCCCTGACGC GCGCAGGCTG CAAGGTCCAC GCGACTTCCA GCCTTGTGAC GCTGATGCGC
TGGGTGGAGG AGGGAAAGGG CGATCTGGTG ATCTCCGACG TGGTCATGCC CGATGGCAAT
GGTCTCGACA CCTTGCCCCA GATTACCGAG GCGCGACCGG GCCTGCCGGT GATTATCATT
TCGGCCCAGA ACACGATCAT GACGGCGATC CAGGCGACCG AAAAGGACGC CTACGATTAT
CTGCCAAAAC CGTTTGATCT GCCGGATCTG ATGAAACGGG CGGCGCGCGC GCTGGATCTC
AAGCGCCGTG CGCCCGTCGC CGCGAAGGCA TCGGAACCGG CACTGCCCGC GACCGGTGAG
GATCTGCCAT TGGTGGGGCG CACGCCCGCG ATGCAGGCCC TTTATCGCCT TGTGGCGCGG
GTGATGAATA CCGATCTGAC GGTGCTGGTC ACAGGCGAAA GCGGCACCGG CAAGTCCTTG
ATCGCGCGTG CAATTCACGA CTTCTCGGAC CGTCGGACAT TGCCTTTCGT CGTGGCTTCC
GCCGCTGATC TGCGCGGCGC GGATGGGCCC TCGATGATCC TCAGTCGCGC CAAGGGCGGC
TCGATCCTGT TTGATGAGGT CGGCGATCTT GATGAGGAGG CGCAGGCCAA AATCGTCCGC
ATGCTTGATG CGATGCCGCA GGCCAATCCG CGCATCATGG CGACCTCCCA GAAAGACCTG
ACCGAGAAGA TGGAGGAGGG GCGCTTTCGC CAGGATCTCT ACTATCGCTT GGGCGGTGTC
GGGATCGCGG TGCCGGCGTT GCGCGAACGG GTCGATGACA TCCCGCTTCT GGCAAGCCAC
TTTCTGGCGC GGGCGGAGCG GGACGGGGCC GCCCCCCGCC GGTTCTCGGA CGCTGCGATG
GAACTGGTGC GCGCCTATTC CTGGCCCGGC AATGTGCGCC AGCTGGAAAA CTCCATCCGC
CGCCTGACGG TCACCGCGCA GGTCGAAGAG ATCAGCCGCG CGGAAGTGGA GGTCGTTTTG
GGCTCGCAAC CGGCGATTGA GCCGCTGATG TCGGGCGCGA GTGAGGGCGA CAAACTCAGC
GCATCGGTGG CCAAACATCT GCGCCGCTAC TTCGATCTTC ACGGCGGCGT CCTGCCTGCA
CCCGGCCTAT ATGCCCGTAT TCTAAAGGAA GTTGAGGCCC CATTGATCGA AATCGCACTG
GATGCGACGG CGGGCAATCA AGCTAAATGT GCCGATCTTC TGGGGATCAA CCGCAATACC
TTGCGTAAAA AGATCACCGA TCTGGATATT CGCGTGACAC GCCGCCGCAA ACTGGTGTAA
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| Protein sequence | MDGTVLVADD DRTIRTVLTQ ALTRAGCKVH ATSSLVTLMR WVEEGKGDLV ISDVVMPDGN
GLDTLPQITE ARPGLPVIII SAQNTIMTAI QATEKDAYDY LPKPFDLPDL MKRAARALDL
KRRAPVAAKA SEPALPATGE DLPLVGRTPA MQALYRLVAR VMNTDLTVLV TGESGTGKSL
IARAIHDFSD RRTLPFVVAS AADLRGADGP SMILSRAKGG SILFDEVGDL DEEAQAKIVR
MLDAMPQANP RIMATSQKDL TEKMEEGRFR QDLYYRLGGV GIAVPALRER VDDIPLLASH
FLARAERDGA APRRFSDAAM ELVRAYSWPG NVRQLENSIR RLTVTAQVEE ISRAEVEVVL
GSQPAIEPLM SGASEGDKLS ASVAKHLRRY FDLHGGVLPA PGLYARILKE VEAPLIEIAL
DATAGNQAKC ADLLGINRNT LRKKITDLDI RVTRRRKLV
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