| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2235 |
|---|
| Symbol | |
|---|
| ID | 3934689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2239442 |
|---|
| End bp | 2240590 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904592 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| Protein accession | YP_510177 |
|---|
| Protein GI | 89054726 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC CTGCGCAACG TGCCACCGCT ATTATCGTCG CTGCCGGACG CGGTATCCGC
GCTGGAGGGG GCGAACCCAA GCAATGGCGG CGCATTGCAG GCCGCAGTAT CGTGGAATGG
TCGGTGAACC GTTTCGCGGC GCATCACGCG GGCTTTGATG TGGTCCTTGT GATCCATCCA
GACGATGAAT GGCGGCTGAA CGGCCTCGAC CTGCCGACGA CATTGCGGGT TGTGCATGGG
GGCGATAGCC GCGCGGCATC GGTCAAAGCA GGGCTGGCGG TGTGTTGCGA TGCGGGCCAC
GTGCTGATCC ACGACGTGGC GCGGCCTTGC GTGAGTTTGG CGGTCATCCA ATCGGTGTTG
GACGCCACAC GCGCCGGGGG GGCCGCCGCA CCCGCCCTGC CCGTCACCGA TGCGTTGTGG
CGGGGGGACA CCCATGTGTC CGGCACCCAG AACCGCGACG GATTGTGGCG CGCGCAGACG
CCGCAAGGCT TTGACGTGTC CGCCATTCGT GCAGCACATG CGGCACATGA TGGCACAGCC
GCCGATGACG TGGAGGTTGC GCGCCTGGCG GGGATAGACG TGGCCATCGT GCCGGGTGAC
GAGGCCAACC TGAAGATCAC CGGTCCAGAG GATTTCGCAC GCGCCGAGGC GCTGCTGACG
GGAGGCGACA TGGATATCAG GGTCGGCAAT GGATTTGACG TGCACCGCTT CGGGCCGGGT
GATCAGGTCT GGTTGTGCGG TATCTCGGTT CCGCACACCC GCGGCTTGCA GGGGCATTCC
GACGCGGATG TCGGGCTGCA TACGTTGACC GATGCGATCT ATGGCGCGTT GGCCGAGGGC
GATATCGGCA CCCATTTCCC GCCAAGTGAC CCCCAATGGA AGGACGCAGA GAGCCATATT
TTCCTGACCC ACGCGGTGGA GCTTGCGGCG AACCGGGGCT TCAGCATCAC CAATGCGGAT
CTGACATTGA TCTGTGAGCA GCCCAAGATC GGGCCCGTCG CGAGCGCCAT GCGCGCCCGC
GTGGCCGACC TTCTGCGGAT TGACGTGGCC CGCGTCTCCG TCAAGGCCAC AACGTCCGAG
CGGCTTGGGT TCACCGGCCG GGAGGAAGGG ATCGCGGCGC TGGCCACGAT CACGCTGGTG
GCCCGATGA
|
|---|
| Protein sequence | MEKPAQRATA IIVAAGRGIR AGGGEPKQWR RIAGRSIVEW SVNRFAAHHA GFDVVLVIHP
DDEWRLNGLD LPTTLRVVHG GDSRAASVKA GLAVCCDAGH VLIHDVARPC VSLAVIQSVL
DATRAGGAAA PALPVTDALW RGDTHVSGTQ NRDGLWRAQT PQGFDVSAIR AAHAAHDGTA
ADDVEVARLA GIDVAIVPGD EANLKITGPE DFARAEALLT GGDMDIRVGN GFDVHRFGPG
DQVWLCGISV PHTRGLQGHS DADVGLHTLT DAIYGALAEG DIGTHFPPSD PQWKDAESHI
FLTHAVELAA NRGFSITNAD LTLICEQPKI GPVASAMRAR VADLLRIDVA RVSVKATTSE
RLGFTGREEG IAALATITLV AR
|
|---|
| |