Gene Jann_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2225 
Symbol 
ID3934679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2230573 
End bp2231703 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637904582 
Producthypothetical protein 
Protein accessionYP_510167 
Protein GI89054716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0551964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CAAACCAGAA CATCAGCCCA AGACTGCCCA GATGGGTGCC AGAGGCGGCA 
CTCCAATACC TGGCGCATGT GGCTGAGGGT CAATCCTTGC GCGACATCGC AAAAGAGACC
GGGCAGGCGC CGTCGACGAT TTCTCGACGC GTCCAGAAAA TCGAAGCCCG GCGTGACGAT
CTACTCATAG ATGAGGCGCT TAGCTGCCTG GCCGAGGCAA CCAGGCCAGC TCACAAACGG
ACAAAAAATA AGGAGATGAG GCGCATGACT GCCCCTATTC GGACGCCACT TCACGACGAG
GCCCTGATTA CCCGTGAAGC CCGGCGCATT CTTCGCCGCC TATGCGAAAC TGGTGCGGTT
TTGGCGGTGG CCCAGGACAT GGACAAAGCC GTGGTGCTGC GTCAGGGCGC CGACGGTGAT
CAGACCCGCA CGGCCGTGCT GGATCGGCGC GTGGCGCAGG CATTTGCGGT GAAGGACTGG
ATTTCTTGCG TGCAGCAGGG CGGGAAACTG GCCCGATACG CGATCACCGG CGTGGGCAAA
ACCGCGTTGA AGCGGCTGCT GGAAGAGGAT CGCAAGCGTC GGATGGGAAC GGCCGGCTTT
GCCGAAGGAC CCACGGCGTT CCAGGGCCAG CATGCCGATT GGGGGACACG CTCGGTTGCC
GGGGCGGGTG GCAAGCGGGA AAACCTGCGC GTCAACCTGT CCGAGTCGCC CTTGGCCGGG
CTCGCGCGGC GCAAGGGCTC GGATGGAAAA CCGTTTCTGG GGCCAGAACT GGTGCAAGCC
GGAGAGCGGC TGCGCGAGGA TTTTGAGCGC GCCCAGATGG GGCCGCGCGT GGGTCAGAAC
TGGGACCGGT TCCTGTCCGG CTCGGACCGG GGCGGCTTCA TGTCCGATGG TGGGATAGGG
GAGGGACCCC GGGCCGCGCG CCAGCGTGTC TCCGAGGCCC TCGATGCCCT TGGGCCGGGG
CTTGGGGATG TTGTCATGCG GGTCTGCTGC TTTCTGGAAG GGCTCGAATC CGCCGAAAAA
CGCCTTGGAT GGTCCGCGCG TTCGGGCAAG GTGGTTCTCA AGATCGGGCT ACAACGGCTG
TTGCAACACT ACGAGCAGCA TCACGGCTTC GTGCCCGCGC AACGGGGCTG A
 
Protein sequence
MTQTNQNISP RLPRWVPEAA LQYLAHVAEG QSLRDIAKET GQAPSTISRR VQKIEARRDD 
LLIDEALSCL AEATRPAHKR TKNKEMRRMT APIRTPLHDE ALITREARRI LRRLCETGAV
LAVAQDMDKA VVLRQGADGD QTRTAVLDRR VAQAFAVKDW ISCVQQGGKL ARYAITGVGK
TALKRLLEED RKRRMGTAGF AEGPTAFQGQ HADWGTRSVA GAGGKRENLR VNLSESPLAG
LARRKGSDGK PFLGPELVQA GERLREDFER AQMGPRVGQN WDRFLSGSDR GGFMSDGGIG
EGPRAARQRV SEALDALGPG LGDVVMRVCC FLEGLESAEK RLGWSARSGK VVLKIGLQRL
LQHYEQHHGF VPAQRG