| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2181 |
|---|
| Symbol | |
|---|
| ID | 3934635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2187530 |
|---|
| End bp | 2187967 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637904538 |
|---|
| Product | Holliday junction resolvase YqgF |
|---|
| Protein accession | YP_510123 |
|---|
| Protein GI | 89054672 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.659798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGAC TCATCGGGCT TGATCTGGGG ACGAAGACCA TCGGTGTCGC GCTGTCCGAC
AGGCTGCTGA CCTCGGCCAG CGCGCTGGAG ACGGTGAAGC GCAAGAAATT TGGCGTGGAT
GCTGATGCCC TTGCCGGTTT GATTGCCAAG CACGAGGTCG GCGGGATCAT CCTTGGCCTG
CCCCGCAATA TGGACGGATC GGAAGGACCG CGCGCCCAAG CGACCCGGGC CTTTGCCCTG
AACCTGTCGC GCCGGGGCGA TTTTGCGCAT CTGGCGCTGG GGTTCTGGGA CGAACGGCTC
AGCACCGTCG CGGCGGAGCG CGCGTTGATT GCGGCGGATA CGAGCCGAAA GCGTCGCTCT
GAAGTGATCG ACGCCGTGGC CGCGAGCTAT ATCTTGCAAG GTGCGCTGGA CCGGTTGCGC
CATTTGAGGG CTGTGTGA
|
|---|
| Protein sequence | MRGLIGLDLG TKTIGVALSD RLLTSASALE TVKRKKFGVD ADALAGLIAK HEVGGIILGL
PRNMDGSEGP RAQATRAFAL NLSRRGDFAH LALGFWDERL STVAAERALI AADTSRKRRS
EVIDAVAASY ILQGALDRLR HLRAV
|
|---|
| |