| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2177 |
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| Symbol | |
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| ID | 3934631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2185441 |
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| End bp | 2186265 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904534 |
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| Product | hypothetical protein |
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| Protein accession | YP_510119 |
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| Protein GI | 89054668 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00465003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAT TAGCTGAGTT TTTGCCGATG CTGGCGCTGA TCCTTGCGAT TGGGGCCATG
GCCGGCGTTA TCGCGGGCCT TCTTGGCGTG GGCGGCGGCA TTGTCCTGGT GCCCGCGTTC
TTCTTTGCCT TTGAAGGGCT TGGATACAGC ACCGATGGGT TGATGCAGAT CTGCCTTGCC
ACGTCGCTGG CCACGATTGT GGTGACGTCG GTCAGGTCCG TCATGGGCCA CCACAAGAAG
GGGGCGGTGG ACTGGGATAT CCTGCGCGCC TGGGGGCCGG GCATCGCCAT CGGCGCGGCT
TTGGGTGTCA TCGTGGCCAG TGGCCTCCGC AACGAAGTGT TGATGGCCAT TTTCGGTGTT
CTGGGTCTTG GCGTGGGCCT TTACATGGCG CTTGGACGGT CTGAGTGGCG GTTGGGCGAC
CAGATGCCCG GAGCCTTCGG CACCATCGCC TCATCGCCGG TCCTGGGGTT TCTGTCGGTC
CTGATGGGGA TTGGCGGCGG GTCCTTCGGG GTACCGATGA TGACGCTGTT TGGCGTGGCG
ATCCACCGGG CGGTGGCGAC GGCGGCGGGC TTCGGTGTGA TCATCGCGGT GCCTGCGGTC
ATTGGATTTC TTCTGACGGG CAGTGATGTG GCCAACCGGC CGCCCTATGC TGTGGGCCAG
GTCAATATCG TGGCCTTCGT GGCCGTCATC GCGATGACGC TGATCACCAC GCCATGGGGC
GTGAAGCTGG CCCATGCGAT GGACCCCAAA CCGCTCAAGC GCGTCTTTGC GGTCTTCATC
ATGATCATGG CGCTCAACAT GCTGCGCAAG GCCTCTGGTT ATTGA
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| Protein sequence | MPELAEFLPM LALILAIGAM AGVIAGLLGV GGGIVLVPAF FFAFEGLGYS TDGLMQICLA
TSLATIVVTS VRSVMGHHKK GAVDWDILRA WGPGIAIGAA LGVIVASGLR NEVLMAIFGV
LGLGVGLYMA LGRSEWRLGD QMPGAFGTIA SSPVLGFLSV LMGIGGGSFG VPMMTLFGVA
IHRAVATAAG FGVIIAVPAV IGFLLTGSDV ANRPPYAVGQ VNIVAFVAVI AMTLITTPWG
VKLAHAMDPK PLKRVFAVFI MIMALNMLRK ASGY
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