Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2144 |
Symbol | |
ID | 3934598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2151417 |
End bp | 2151974 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904501 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_510086 |
Protein GI | 89054635 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.565906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC AACTTACTCG ACGCTCGCTT ATTCGGGCGT TCGCAGCCAC GACTGTTGCC GCCGCGCCGG TCATGGCCAA CGCGACAGGC CTTTTGAGAG GCGCTGGCGA TATCCGGAAA CTCCAGATGT ATAATGGTCG TGCGGGCGAA AGCCTCAACA TGATCTACTG GATTGAGGGT GACTATATCG CGCCCGCATT GGACGAAGTG AACTACTTCA TGCGCGATTG GCGCACCGAT GGCGTGATCG ACATCAACAT CGGCACCATC GACATCATGG CCGCCGCGCA TAATCTTCTT GAGACGAGTG AGCCTTACAC GCTTCTGTCC GGCTACCGCT CGCCCGAGAC CAACGCGATG TTGCGGCGCC GGTCGTCCGG TGTTGCGCGG AACTCCCGCC ACATGGTTGG CGAGGCGGCG GACCTTCAGA TGCAATCCCG CTCGGTCACG CAGGTGTTCA ACGCGGCGCG ATCCTGCAAT GCAGGCGGCG TCGGTCGCTA CTCCCGCTCC AACTTCGTCC ACATGGACTG CGGCCCGGTT CGCAGCTGGG GTGGCTGA
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Protein sequence | MTTQLTRRSL IRAFAATTVA AAPVMANATG LLRGAGDIRK LQMYNGRAGE SLNMIYWIEG DYIAPALDEV NYFMRDWRTD GVIDINIGTI DIMAAAHNLL ETSEPYTLLS GYRSPETNAM LRRRSSGVAR NSRHMVGEAA DLQMQSRSVT QVFNAARSCN AGGVGRYSRS NFVHMDCGPV RSWGG
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