Gene Jann_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2144 
Symbol 
ID3934598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2151417 
End bp2151974 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID637904501 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_510086 
Protein GI89054635 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.565906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC AACTTACTCG ACGCTCGCTT ATTCGGGCGT TCGCAGCCAC GACTGTTGCC 
GCCGCGCCGG TCATGGCCAA CGCGACAGGC CTTTTGAGAG GCGCTGGCGA TATCCGGAAA
CTCCAGATGT ATAATGGTCG TGCGGGCGAA AGCCTCAACA TGATCTACTG GATTGAGGGT
GACTATATCG CGCCCGCATT GGACGAAGTG AACTACTTCA TGCGCGATTG GCGCACCGAT
GGCGTGATCG ACATCAACAT CGGCACCATC GACATCATGG CCGCCGCGCA TAATCTTCTT
GAGACGAGTG AGCCTTACAC GCTTCTGTCC GGCTACCGCT CGCCCGAGAC CAACGCGATG
TTGCGGCGCC GGTCGTCCGG TGTTGCGCGG AACTCCCGCC ACATGGTTGG CGAGGCGGCG
GACCTTCAGA TGCAATCCCG CTCGGTCACG CAGGTGTTCA ACGCGGCGCG ATCCTGCAAT
GCAGGCGGCG TCGGTCGCTA CTCCCGCTCC AACTTCGTCC ACATGGACTG CGGCCCGGTT
CGCAGCTGGG GTGGCTGA
 
Protein sequence
MTTQLTRRSL IRAFAATTVA AAPVMANATG LLRGAGDIRK LQMYNGRAGE SLNMIYWIEG 
DYIAPALDEV NYFMRDWRTD GVIDINIGTI DIMAAAHNLL ETSEPYTLLS GYRSPETNAM
LRRRSSGVAR NSRHMVGEAA DLQMQSRSVT QVFNAARSCN AGGVGRYSRS NFVHMDCGPV
RSWGG