Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2082 |
Symbol | |
ID | 3934535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2090526 |
End bp | 2091725 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904438 |
Product | hypothetical protein |
Protein accession | YP_510024 |
Protein GI | 89054573 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.265611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGACT TTTTCAGCGC ACTCCTGTTG CAGGCGGGCT ACAACGCCGC CCTCGTGGCC GTCGGCGCTG CGCTTCTGGG CTTTGCGGCA GGGGCCGGCG GCAGCTTCCT GTTCCTGCGC AAACGCGCGT TGGTGTCAGA TGCGGTGGCC CATGCGACGC TGCCCGGCGT GGGTCTTGCC TTCATCGTCA TGGTGGCTTT CGGCGGCGAC GGGCGGAGCC TGCCGGGCCT GCTGATTGGG TCTGCCATCT CCGCTTGGCT TGGCCTTCTG GCCGTGGAGT GGATGGTGCG CCGCACCCGC CTGTCGGAGG ACGCGGCCAT CGGCGCGGTT CTGTCGGTGT TCTTCGGCTT GGGCGTTGTG TTACTGACCG TGATCCAGAG CATGAGCCAG GGACGACAGG CGGGTCTTGA AGGGTTTCTT CTGGGCTCCA CCGCTGGAAT GCTGTTTCAG GATGCGGTGC TGATCGCGGG CGGTGGGGCC ATCGTTGTGC TGCTGATCTG GCTGTTACGC CGCCCCATGA CGCTGGTGGC GTTTGATCCC GGTTTCGCGG CGGCGCGCGG TGTGGATGTG CGCCGGGTGG ACCTGGCGAT GATGGGGCTT GTGCTGGCGG TCACCGTGAT TGGCCTGAAA CTCGTCGGTC TGATCCTGAT CGTGGCGCTG TTGATCATCC CGCCCGTCAC TGCGCGGTTC TGGTCTGAGC GGGCCGAGGC CGTTGTCTGG GCCGCAGGCG TCATTGGGGC CGTGTCGGGC TACGTCGGTG CGGCGCTGTC GGCCTCGGCC CCTGCATTGC CCACGGGGCC GATCATTGTG CTGATCTCTG CCACCTTGTT TGCAATCTCT CTGCTCTTCG CACCCGCACG CGGCGTGCTC GCCTCCATCC TCGCCCGCCG CGCATTTCAG GCCCGCGTGC ACCGACGGCA GGGTCTTCTG GCGTTGTCGC GATCCGAGCC GATCCATGAT CCGCTGACCG TGAAAATCCT GCGCCGGGAG GGACTTATGC GCGCCGATGG TGTGGCGACG GACGCAGGGC AAGCGGCGGG CGCGAAGGTC GCGCGGGATG AGCGGCGCTG GTCCATCGCC CGCAAACAGC ACCACGATAC GGCGCTGACG GGGCGCTATG ACGGGCTGAC CCCCATAGAG GACGTCTTCA CCGCCGATGA GATCGCCCAT TTCGATACAG CCATGATGAG GGGCGCTTAG
|
Protein sequence | MSDFFSALLL QAGYNAALVA VGAALLGFAA GAGGSFLFLR KRALVSDAVA HATLPGVGLA FIVMVAFGGD GRSLPGLLIG SAISAWLGLL AVEWMVRRTR LSEDAAIGAV LSVFFGLGVV LLTVIQSMSQ GRQAGLEGFL LGSTAGMLFQ DAVLIAGGGA IVVLLIWLLR RPMTLVAFDP GFAAARGVDV RRVDLAMMGL VLAVTVIGLK LVGLILIVAL LIIPPVTARF WSERAEAVVW AAGVIGAVSG YVGAALSASA PALPTGPIIV LISATLFAIS LLFAPARGVL ASILARRAFQ ARVHRRQGLL ALSRSEPIHD PLTVKILRRE GLMRADGVAT DAGQAAGAKV ARDERRWSIA RKQHHDTALT GRYDGLTPIE DVFTADEIAH FDTAMMRGA
|
| |