Gene Jann_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2082 
Symbol 
ID3934535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2090526 
End bp2091725 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID637904438 
Producthypothetical protein 
Protein accessionYP_510024 
Protein GI89054573 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.265611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT TTTTCAGCGC ACTCCTGTTG CAGGCGGGCT ACAACGCCGC CCTCGTGGCC 
GTCGGCGCTG CGCTTCTGGG CTTTGCGGCA GGGGCCGGCG GCAGCTTCCT GTTCCTGCGC
AAACGCGCGT TGGTGTCAGA TGCGGTGGCC CATGCGACGC TGCCCGGCGT GGGTCTTGCC
TTCATCGTCA TGGTGGCTTT CGGCGGCGAC GGGCGGAGCC TGCCGGGCCT GCTGATTGGG
TCTGCCATCT CCGCTTGGCT TGGCCTTCTG GCCGTGGAGT GGATGGTGCG CCGCACCCGC
CTGTCGGAGG ACGCGGCCAT CGGCGCGGTT CTGTCGGTGT TCTTCGGCTT GGGCGTTGTG
TTACTGACCG TGATCCAGAG CATGAGCCAG GGACGACAGG CGGGTCTTGA AGGGTTTCTT
CTGGGCTCCA CCGCTGGAAT GCTGTTTCAG GATGCGGTGC TGATCGCGGG CGGTGGGGCC
ATCGTTGTGC TGCTGATCTG GCTGTTACGC CGCCCCATGA CGCTGGTGGC GTTTGATCCC
GGTTTCGCGG CGGCGCGCGG TGTGGATGTG CGCCGGGTGG ACCTGGCGAT GATGGGGCTT
GTGCTGGCGG TCACCGTGAT TGGCCTGAAA CTCGTCGGTC TGATCCTGAT CGTGGCGCTG
TTGATCATCC CGCCCGTCAC TGCGCGGTTC TGGTCTGAGC GGGCCGAGGC CGTTGTCTGG
GCCGCAGGCG TCATTGGGGC CGTGTCGGGC TACGTCGGTG CGGCGCTGTC GGCCTCGGCC
CCTGCATTGC CCACGGGGCC GATCATTGTG CTGATCTCTG CCACCTTGTT TGCAATCTCT
CTGCTCTTCG CACCCGCACG CGGCGTGCTC GCCTCCATCC TCGCCCGCCG CGCATTTCAG
GCCCGCGTGC ACCGACGGCA GGGTCTTCTG GCGTTGTCGC GATCCGAGCC GATCCATGAT
CCGCTGACCG TGAAAATCCT GCGCCGGGAG GGACTTATGC GCGCCGATGG TGTGGCGACG
GACGCAGGGC AAGCGGCGGG CGCGAAGGTC GCGCGGGATG AGCGGCGCTG GTCCATCGCC
CGCAAACAGC ACCACGATAC GGCGCTGACG GGGCGCTATG ACGGGCTGAC CCCCATAGAG
GACGTCTTCA CCGCCGATGA GATCGCCCAT TTCGATACAG CCATGATGAG GGGCGCTTAG
 
Protein sequence
MSDFFSALLL QAGYNAALVA VGAALLGFAA GAGGSFLFLR KRALVSDAVA HATLPGVGLA 
FIVMVAFGGD GRSLPGLLIG SAISAWLGLL AVEWMVRRTR LSEDAAIGAV LSVFFGLGVV
LLTVIQSMSQ GRQAGLEGFL LGSTAGMLFQ DAVLIAGGGA IVVLLIWLLR RPMTLVAFDP
GFAAARGVDV RRVDLAMMGL VLAVTVIGLK LVGLILIVAL LIIPPVTARF WSERAEAVVW
AAGVIGAVSG YVGAALSASA PALPTGPIIV LISATLFAIS LLFAPARGVL ASILARRAFQ
ARVHRRQGLL ALSRSEPIHD PLTVKILRRE GLMRADGVAT DAGQAAGAKV ARDERRWSIA
RKQHHDTALT GRYDGLTPIE DVFTADEIAH FDTAMMRGA