| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2079 |
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| Symbol | |
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| ID | 3934532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2087343 |
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| End bp | 2088680 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904435 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_510021 |
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| Protein GI | 89054570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.172467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.275704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTGG CAAAACGCGA CTGGGTGCCC GCAGACAGTG ACGCCCTGGT TCAATCCATC
GCCGCACGCA CGTCGGCGTC GGACGGCGCC ACCATCGCCG CGCGGCTTAC GGCTTTGGGG
GCCGAGAACC GCCGCATTCA TGAGGACGCC TGCTTCAACC TCAACCCCGC CACCAATGTG
ATGAACCCGG CGGCGGAGGC GCTTTTGTCC AACGGCATGG GCACGCGCCC GTCCCTTGGC
TACCCCGGCG ACAAATATGA GATGGGGCTG GAGGCGGTGG AGGAGGCGGA GGTCATCGCC
GCAGAACTGG CCGCTGAGGT CTTCCGCGCG CGCTTTGCTG AGATTCGCGT GGCCTCCGGC
GCGATGGCCA ACCTCTACGC CTTTATGGCG ACCTGCCAAC CCGGCGACAC AATCATCGTG
CCGCCCGCAT CCATCGGCGG CCATGTCACC CACCACGGGG CTGGATGCGC GGGCCTTTTC
GGATTGCGGA TCGTGGAGGC CCCCGTTTAT CCAAATTGTT ATACCATTGA TATACCCGGC
CTCGCGGATC TGGCGGCAAA AGAGCGCCCG GCGCTGATCA CTTTGGGTGG GTCCCTGAAC
CTGTTGCCCC ATCCTGTGGC GGAGGTGCGG GCTATTGCCG ACGACGTCGG GGCCTATCTG
CTGATGGATG CCGCGCATCA ATGCGGCCTC TTTGCTGGGC AGGCCTGGCC TGATCCACTG
GCCTCTGAAA ATGGGGCAGA GGGCGCGCAT CTGATGACGA TGAGCACCTA TAAATCCCTC
GGCGGACCTG CGGGCGGGTT AATCGTGACC AACGACGCCG AGATCGCCAA GCGTCTGGAT
TCCATTGCTT TTCCCGGCAT GACGGCCAAT TTCGATGCCT CCAAATCCGC CGCCCTCGCG
CGCAGCCTGT TGGATTGGCG CGACCATGGC CGGGCCTACG CCGCCAAGAT GGTGGAGGTG
GCGAAGGCGC TGTCCGATGC GCTGAAGGCA CAGGGCATTC CGCTGTTTGA AACGGCACGC
GGTGCCACGC AAAGCCACCA ATTTGCCGTG CCAGCCTATG AGCTCGGGGG CGGGCAGGCG
GCCTCCAAAC ACCTTTACCG CGCGGGGATC ATCGCCTGTG GGATCGGCAT CCCGGGCCCA
GAAGTTCCCA ATGATATGAA TGCGATACGT TTTGGGACAC CCGAAATTGT CCGCTTTGGC
GTGGGGCAGG GGTCGGATGA TGTCACCACC CTGGCAGGCC TCATTGCGCG GGCTCTGCGC
AGTGATCGAC CAGAGGATCT TGCCGGGGAA ACAGCCGCCT TTCGGAGCAA TTTCAAAGCC
TTGCACTATG TATCTTAA
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| Protein sequence | MVLAKRDWVP ADSDALVQSI AARTSASDGA TIAARLTALG AENRRIHEDA CFNLNPATNV
MNPAAEALLS NGMGTRPSLG YPGDKYEMGL EAVEEAEVIA AELAAEVFRA RFAEIRVASG
AMANLYAFMA TCQPGDTIIV PPASIGGHVT HHGAGCAGLF GLRIVEAPVY PNCYTIDIPG
LADLAAKERP ALITLGGSLN LLPHPVAEVR AIADDVGAYL LMDAAHQCGL FAGQAWPDPL
ASENGAEGAH LMTMSTYKSL GGPAGGLIVT NDAEIAKRLD SIAFPGMTAN FDASKSAALA
RSLLDWRDHG RAYAAKMVEV AKALSDALKA QGIPLFETAR GATQSHQFAV PAYELGGGQA
ASKHLYRAGI IACGIGIPGP EVPNDMNAIR FGTPEIVRFG VGQGSDDVTT LAGLIARALR
SDRPEDLAGE TAAFRSNFKA LHYVS
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