| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2068 |
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| Symbol | |
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| ID | 3934521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2077362 |
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| End bp | 2078759 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904424 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_510010 |
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| Protein GI | 89054559 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.803704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.600316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCAGAG GCGTCGCGCC CGCCGAGGTG ACCTGGGGCG GCACTGATAC GCCGCGCGGG
CTGTTTGATG AGCCGTCATC CGTGGCGCAA AGCGGCGACA CGAGCGTTCC GCGCAGCTTC
ATTTCCATGG CCGACAGTGT CGTCTGGCAC AGCGATCCGT CCCGCTTCGC GTGGCTCTAT
GCGTTTTTGT GGCGGCTGCG CGACGCCCCG CATCTGATGA CAGATCGCGG TGACGCCGAC
CTTGCCCGTC TGCGCGCGAT GGAGAAGAAC GTGCACCGCT GCCAGCACAA GATGAAGGCT
TTCGTGCGTT TCCGCGACAT CGGTGAGGCG GAGACCCCCC GCCGGTCCTT TGCCGCCTGG
TTCGAGCCGA CCCATCACAC GGTGGAGCCC ACGGCGGGCT TTTTCCAACG ACGTTTCGCC
GATATGGACT GGCGCATCAT CACGCCCGAC ATTTCAGCCA TTTTCGAAGG TGGCACGCTG
CGGTTCATTG AGGATCAGCC CAAACCGGGC CTGCCCGATG ACGCGAGCGA GGCGCTGTGG
ATCACGTATT ATCGCAACAT CTTCAATCCG GCGCGCTTGA AGGTGCAGGC GATGCAGTCC
GAGATGCCAA AAAAGTACTG GAAGAACCTG CCGGAGGCCG CTGCGATCCC GGATCTGATC
GCCACCGCGC CCGCCCGTGC CCGCGCGATG GCCGAGGCCG CGCCGACCTT GCCGCCAACC
CGCATGGCCT CCGCGCAGGA GCAGCAGCGC GCGTTTGCAT CGTCTTGGGA GGGCTCGGAT
GATGCGTTTC TGGCAGCGGT GAAGGGCTGC ACGCGCTGTC CGCTCCATCG ACACGCCACG
CAGACCGTGC CCGGGGAAGG GCCGGCCAAG GCCGCGCTGA TGATCGTGGG GGAGCAGCCG
GGCGATCAGG AGGATTTGCA GGGTCGCCCC TTCGTGGGGC CCGCGGGTCA CGTGTTCGAT
CAGGTCGCGG CGGAGGTGGG GTTGGACCGC GCAACCGCCT ACATCACCAA CGCCGTGAAG
CATTTCAAGT TCGTGCCACG GGGCAAGCGG CGTTTGCATC AGCGGCCCAA TGCGGGGGAG
GTCGCCTATT GCAAATGGTG GCTGGAGGCA GAGATTGCGC GCGTGACCCC CAAGCTGATC
CTGGCCATGG GGTCCACCGC GGCGCTTGCA TTGACCGGGT CGGGCAACAA CCTGCTGAAA
CGGTGCGGGA CAATTGAAGC CGTCGCCGGG CGACCACCTG TCCTGATCTC TTTGCACCCC
TCATACATCT TGCGGATCAA GGATGCCGAT CAGCGGGCGG AGGCCCGGCA GATGTACCAG
CGTGATCTCG GGCGCGCCAC ACAGATGGTG CAGGAGCGGG CCGGGCCGAT CGGTCTCGCA
GAAAACGGGC CGGAGTGA
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| Protein sequence | MARGVAPAEV TWGGTDTPRG LFDEPSSVAQ SGDTSVPRSF ISMADSVVWH SDPSRFAWLY
AFLWRLRDAP HLMTDRGDAD LARLRAMEKN VHRCQHKMKA FVRFRDIGEA ETPRRSFAAW
FEPTHHTVEP TAGFFQRRFA DMDWRIITPD ISAIFEGGTL RFIEDQPKPG LPDDASEALW
ITYYRNIFNP ARLKVQAMQS EMPKKYWKNL PEAAAIPDLI ATAPARARAM AEAAPTLPPT
RMASAQEQQR AFASSWEGSD DAFLAAVKGC TRCPLHRHAT QTVPGEGPAK AALMIVGEQP
GDQEDLQGRP FVGPAGHVFD QVAAEVGLDR ATAYITNAVK HFKFVPRGKR RLHQRPNAGE
VAYCKWWLEA EIARVTPKLI LAMGSTAALA LTGSGNNLLK RCGTIEAVAG RPPVLISLHP
SYILRIKDAD QRAEARQMYQ RDLGRATQMV QERAGPIGLA ENGPE
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